Feature identity
- Identifier
- PaHa02g44630.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,173 bp
- Genomic location
- 2:102,568,960–102,585,177
- Strand
- −
Hass · mRNA
PaHa02g44630.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,173
- bp
- 2:102,568,960–102,585,177
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g44630
- eggNOG
- Preferred name: PEX10 | Seed ortholog: 337451.A0A3S3MUP1 | COG: S | eggNOG OG: Pex2_Pex12@131567|A-1*, Pex2_Pex12@2759|D-3, zf-RING_2@131567|dG-20, zf-RING_2@2759|wv-22
- Gene Ontology
- GO:0004842 ubiquitin-protein transferase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005777 peroxisome; GO:0005778 peroxisomal membrane; GO:0005829 cytosol; GO:0006513 protein monoubiquitination; GO:0006635 fatty acid beta-oxidation; GO:0007031 peroxisome organization; GO:0009793 embryo development ending in seed dormancy; GO:0009853 photorespiration; GO:0016558 protein import into peroxisome matrix; GO:0061630 ubiquitin protein ligase activity
- KEGG
- EC: ec:2.3.2.27, ec:6.1.1.2 | KO: K13346 | Pathway: 04146 | BRITE: 00001, 04121
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g44630.1-protein
derives_frommRNAPaHa02g44630.1
mRNAPaHa02g44630.1
part_ofgenePaHa02g44630
CDS
part_ofPaHa02g44630.1-CDS-2-1787993825:102568960..102569062mRNAPaHa02g44630.1
CDS
part_ofPaHa02g44630.1-CDS-2-1787993825:102574435..102574523mRNAPaHa02g44630.1
CDS
part_ofPaHa02g44630.1-CDS-2-1787993825:102574727..102574827mRNAPaHa02g44630.1
CDS
part_ofPaHa02g44630.1-CDS-2-1787993825:102576226..102576359mRNAPaHa02g44630.1
CDS
part_ofPaHa02g44630.1-CDS-2-1787993825:102577573..102577651mRNAPaHa02g44630.1
CDS
part_ofPaHa02g44630.1-CDS-2-1787993825:102578266..102578335mRNAPaHa02g44630.1
CDS
part_ofPaHa02g44630.1-CDS-2-1787993825:102580246..102580453mRNAPaHa02g44630.1
CDS
part_ofPaHa02g44630.1-CDS-2-1787993825:102580653..102580747mRNAPaHa02g44630.1
CDS
part_ofPaHa02g44630.1-CDS-2-1787993825:102581264..102581353mRNAPaHa02g44630.1
CDS
part_ofPaHa02g44630.1-CDS-2-1787993825:102582594..102582625mRNAPaHa02g44630.1
CDS
part_ofPaHa02g44630.1-CDS-2-1787993825:102585006..102585177mRNAPaHa02g44630.1
exon
part_ofPaHa02g44630.1-exon-2-1787993825:102568960..102569062mRNAPaHa02g44630.1
exon
part_ofPaHa02g44630.1-exon-2-1787993825:102574435..102574523mRNAPaHa02g44630.1
exon
part_ofPaHa02g44630.1-exon-2-1787993825:102574727..102574827mRNAPaHa02g44630.1
exon
part_ofPaHa02g44630.1-exon-2-1787993825:102576226..102576359mRNAPaHa02g44630.1
exon
part_ofPaHa02g44630.1-exon-2-1787993825:102577573..102577651mRNAPaHa02g44630.1
exon
part_ofPaHa02g44630.1-exon-2-1787993825:102578266..102578335mRNAPaHa02g44630.1
exon
part_ofPaHa02g44630.1-exon-2-1787993825:102580246..102580453mRNAPaHa02g44630.1
exon
part_ofPaHa02g44630.1-exon-2-1787993825:102580653..102580747mRNAPaHa02g44630.1
exon
part_ofPaHa02g44630.1-exon-2-1787993825:102581264..102581353mRNAPaHa02g44630.1
exon
part_ofPaHa02g44630.1-exon-2-1787993825:102582594..102582625mRNAPaHa02g44630.1
exon
part_ofPaHa02g44630.1-exon-2-1787993825:102585006..102585177mRNAPaHa02g44630.1
