Feature identity
- Identifier
- PaHa01g05610.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,305 bp
- Genomic location
- 1:7,276,702–7,292,924
- Strand
- −
Hass · mRNA
PaHa01g05610.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,305
- bp
- 1:7,276,702–7,292,924
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g05610
- eggNOG
- Preferred name: FAD3 | Seed ortholog: 337451.A0A443NJW5 | COG: COG3239 | eggNOG OG: DUF3474@131567|C-2, DUF3474@3398|FJ-12, FA_desaturase@131567|Bc-9, FA_desaturase@3398|DMZ-27!
- Gene Ontology
- GO:0005783 endoplasmic reticulum; GO:0006636 unsaturated fatty acid biosynthetic process; GO:0009507 chloroplast; GO:0042389 omega-3 fatty acid desaturase activity; GO:0102859 acyl-lipid omega-3 desaturase (cytochrome b5) activity
- KEGG
- EC: ec:1.14.19.13, ec:1.14.19.25, ec:1.14.19.35, ec:1.14.19.36 | KO: K10257, K21707 | BRITE: 00001, 01000, 01004
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g05610.1-protein
derives_frommRNAPaHa01g05610.1
mRNAPaHa01g05610.1
part_ofgenePaHa01g05610
CDS
part_ofPaHa01g05610.1-CDS-1-1787993825:7276702..7276896mRNAPaHa01g05610.1
CDS
part_ofPaHa01g05610.1-CDS-1-1787993825:7276996..7277133mRNAPaHa01g05610.1
CDS
part_ofPaHa01g05610.1-CDS-1-1787993825:7277963..7278043mRNAPaHa01g05610.1
CDS
part_ofPaHa01g05610.1-CDS-1-1787993825:7278141..7278326mRNAPaHa01g05610.1
CDS
part_ofPaHa01g05610.1-CDS-1-1787993825:7278418..7278510mRNAPaHa01g05610.1
CDS
part_ofPaHa01g05610.1-CDS-1-1787993825:7278617..7278683mRNAPaHa01g05610.1
CDS
part_ofPaHa01g05610.1-CDS-1-1787993825:7278825..7278914mRNAPaHa01g05610.1
CDS
part_ofPaHa01g05610.1-CDS-1-1787993825:7279030..7279380mRNAPaHa01g05610.1
CDS
part_ofPaHa01g05610.1-CDS-1-1787993825:7287034..7287132mRNAPaHa01g05610.1
CDS
part_ofPaHa01g05610.1-CDS-1-1787993825:7292920..7292924mRNAPaHa01g05610.1
exon
part_ofPaHa01g05610.1-exon-1-1787993825:7276702..7276896mRNAPaHa01g05610.1
exon
part_ofPaHa01g05610.1-exon-1-1787993825:7276996..7277133mRNAPaHa01g05610.1
exon
part_ofPaHa01g05610.1-exon-1-1787993825:7277963..7278043mRNAPaHa01g05610.1
exon
part_ofPaHa01g05610.1-exon-1-1787993825:7278141..7278326mRNAPaHa01g05610.1
exon
part_ofPaHa01g05610.1-exon-1-1787993825:7278418..7278510mRNAPaHa01g05610.1
exon
part_ofPaHa01g05610.1-exon-1-1787993825:7278617..7278683mRNAPaHa01g05610.1
exon
part_ofPaHa01g05610.1-exon-1-1787993825:7278825..7278914mRNAPaHa01g05610.1
exon
part_ofPaHa01g05610.1-exon-1-1787993825:7279030..7279380mRNAPaHa01g05610.1
exon
part_ofPaHa01g05610.1-exon-1-1787993825:7287034..7287132mRNAPaHa01g05610.1
exon
part_ofPaHa01g05610.1-exon-1-1787993825:7292920..7292924mRNAPaHa01g05610.1
