Feature identity
- Identifier
- PaHa_c300g00230.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 654 bp
- Genomic location
- unplaced_contig_300:27,827–28,601
- Strand
- −
Hass · mRNA
PaHa_c300g00230.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 654
- bp
- unplaced_contig_300:27,827–28,601
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c300g00230
- eggNOG
- Preferred name: ERG6 | Seed ortholog: 56484.A0A1Y2F7K3 | COG: COG2226 | eggNOG OG: Methyltransf_11@131567|AjK-27, Methyltransf_11@2759|MEt-38, Sterol_MT_C@131567|A-1
- Gene Ontology
- GO:0003838 sterol 24-C-methyltransferase activity; GO:0005575 cellular_component; GO:0005739 mitochondrion; GO:0005741 mitochondrial outer membrane; GO:0005783 endoplasmic reticulum; GO:0005811 lipid droplet; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006696 ergosterol biosynthetic process; GO:0036196 zymosterol metabolic process; GO:0042802 identical protein binding; GO:0044858 plasma membrane raft polarization; GO:0071466 cellular response to xenobiotic stimulus
- KEGG
- EC: ec:2.1.1.41 | KO: K00559 | Pathway: 00100, 01100, 01110 | Module: M00102, M00917 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c300g00230.1-protein
derives_fromgenePaHa_c300g00230
CDS
part_ofPaHa_c300g00230.1-CDS-unplaced_contig_300-1787993825:27827..28156CDS
part_ofPaHa_c300g00230.1-CDS-unplaced_contig_300-1787993825:28278..28601exon
part_ofPaHa_c300g00230.1-exon-unplaced_contig_300-1787993825:27827..28156exon
part_ofPaHa_c300g00230.1-exon-unplaced_contig_300-1787993825:28278..28601