Anise · mRNA

Chr05.g42319.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

5,812
bp
Chr05:67,202,050–67,209,864
genomic location
Record overview

Feature identity

Identifier
Chr05.g42319.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
5,812 bp
Genomic location
Chr05:67,202,050–67,209,864
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
218851.Aquca_007_00239.1,S,[Belongs to the TUB family]
Gene Ontology
Belongs to the TUB family | GO:0006355//regulation of transcription, DNA-templated; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0009555//pollen development; GO:0009889//regulation of biosynthetic process; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0048229//gametophyte development; GO:0048856//anatomical structure development; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0080090//regulation of primary metabolic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | - | GO:0003674//molecular_function; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0005543//phospholipid binding; GO:0008289//lipid binding; GO:0035091//phosphatidylinositol binding; GO:0043167//ion binding; GO:0043168//anion binding
NR
RWR82409.1 tubby-like F-box protein 5 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q6Z2G9.1 RecName: Full=Tubby-like F-box protein 5; Short=OsTLP5; AltName: Full=Tubby-like F-box protein 8; Short=OsTLP8 [Oryza sativa Japonica Group]
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.