Anise · mRNA

Chr10.g72354.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,445
bp
Chr10:36,861,224–36,863,588
genomic location
Record overview

Feature identity

Identifier
Chr10.g72354.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
1,445 bp
Genomic location
Chr10:36,861,224–36,863,588
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
42345.XP_008797802.1,K,[Transcription factor]
Gene Ontology
Transcription factor | GO:0000003//reproduction; GO:0001101//response to acid chemical; GO:0003006//developmental process involved in reproduction; GO:0006082//organic acid metabolic process; GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006629//lipid metabolic process; GO:0006720//isoprenoid metabolic process; GO:0006721//terpenoid metabolic process; GO:0006950//response to stress; GO:0007154//cell communication; GO:0007165//signal transduction; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008299//isoprenoid biosynthetic process; GO:0008610//lipid biosynthetic process; GO:0009058//biosynthetic process; GO:0009267//cellular response to starvation; GO:0009605//response to external stimulus; GO:0009653//anatomical structure morphogenesis; GO:0009685//gibberellin metabolic process; GO:0009686//gibberellin biosynthetic process; GO:0009719//response to endogenous stimulus; GO:0009725//response to hormone; GO:0009739//response to gibberellin; GO:0009740//gibberellic acid mediated signaling pathway; GO:0009751//response to salicylic acid; GO:0009753//response to jasmonic acid; GO:0009755//hormone-mediated signaling pathway; GO:0009791//post-embryonic development; GO:0009867//jasmonic acid mediated signaling pathway; GO:0009889//regulation of biosynthetic process; GO:0009890//negative regulation of biosynthetic process; GO:0009892//negative regulation of metabolic process; GO:0009908//flower development; GO:0009987//cellular process; GO:0009991//response to extracellular stimulus; GO:0010015//root morphogenesis; GO:0010033//response to organic substance; GO:0010371//regulation of gibberellin biosynthetic process; GO:0010373//negative regulation of gibberellin biosynthetic process; GO:0010468//regulation of gene expression; GO:0010476//gibberellin mediated signaling pathway; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010558//negative regulation of macromolecule biosynthetic process; GO:0010565//regulation of cellular ketone metabolic process; GO:0010605//negative regulation of macromolecule metabolic process; GO:0010629//negative regulation of gene expression; GO:0010817//regulation of hormone levels; GO:0014070//response to organic cyclic compound; GO:0016036//cellular response to phosphate starvation; GO:0016053//organic acid biosynthetic process; GO:0016101//diterpenoid metabolic process; GO:0016102//diterpenoid biosynthetic process; GO:0016114//terpenoid biosynthetic process; GO:0019216//regulation of lipid metabolic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0019747//regulation of isoprenoid metabolic process; GO:0019752//carboxylic acid metabolic process; GO:0022414//reproductive process; GO:0022622//root system development; GO:0023052//signaling; GO:0030154//cell differentiation; GO:0031323//regulation of cellular metabolic process; GO:0031324//negative regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031327//negative regulation of cellular biosynthetic process; GO:0031667//response to nutrient levels; GO:0031668//cellular response to extracellular stimulus; GO:0031669//cellular response to nutrient levels; GO:0032350//regulation of hormone metabolic process; GO:0032351//negative regulation of hormone metabolic process; GO:0032353//negative regulation of hormone biosynthetic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0032870//cellular response to hormone stimulus; GO:0033554//cellular response to stress; GO:0033993//response to lipid; GO:0042221//response to chemical; GO:0042445//hormone metabolic process; GO:0042446//hormone biosynthetic process; GO:0042493//response to drug; GO:0042592//homeostatic process; GO:0042594//response to starvation; GO:0043436//oxoacid metabolic process; GO:0043455//regulation of secondary metabolic process; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044249//cellular biosynthetic process; GO:0044255//cellular lipid metabolic process; GO:0044281//small molecule metabolic process; GO:0044283//small molecule biosynthetic process; GO:0045827//negative regulation of isoprenoid metabolic process; GO:0045833//negative regulation of lipid metabolic process; GO:0045892//negative regulation of transcription, DNA-templated; GO:0045934//negative regulation of nucleobase-containing compound metabolic process; GO:0046394//carboxylic acid biosynthetic process; GO:0046677//response to antibiotic; GO:0046885//regulation of hormone biosynthetic process; GO:0046890//regulation of lipid biosynthetic process; GO:0048364//root development; GO:0048367//shoot system development; GO:0048437//floral organ development; GO:0048438//floral whorl development; GO:0048443//stamen development; GO:0048466//androecium development; GO:0048519//negative regulation of biological process; GO:0048523//negative regulation of cellular process; GO:0048608//reproductive structure development; GO:0048731//system development; GO:0048827//phyllome development; GO:0048856//anatomical structure development; GO:0048869//cellular developmental process; GO:0048878//chemical homeostasis; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050801//ion homeostasis; GO:0050896//response to stimulus; GO:0051055//negative regulation of lipid biosynthetic process; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051172//negative regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051253//negative regulation of RNA metabolic process; GO:0051716//cellular response to stimulus; GO:0055062//phosphate ion homeostasis; GO:0055081//anion homeostasis; GO:0055083//monovalent inorganic anion homeostasis; GO:0060255//regulation of macromolecule metabolic process; GO:0061458//reproductive system development; GO:0065007//biological regulation; GO:0065008//regulation of biological quality; GO:0070887//cellular response to chemical stimulus; GO:0071229//cellular response to acid chemical; GO:0071310//cellular response to organic substance; GO:0071370//cellular response to gibberellin stimulus; GO:0071395//cellular response to jasmonic acid stimulus; GO:0071396//cellular response to lipid; GO:0071495//cellular response to endogenous stimulus; GO:0071496//cellular response to external stimulus; GO:0071704//organic substance metabolic process; GO:0072505//divalent inorganic anion homeostasis; GO:0072506//trivalent inorganic anion homeostasis; GO:0080086//stamen filament development; GO:0080090//regulation of primary metabolic process; GO:0090567//reproductive shoot system development; GO:0098771//inorganic ion homeostasis; GO:0099402//plant organ development; GO:1901576//organic substance biosynthetic process; GO:1901700//response to oxygen-containing compound; GO:1901701//cellular response to oxygen-containing compound; GO:1902679//negative regulation of RNA biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903507//negative regulation of nucleic acid-templated transcription; GO:1905392//plant organ morphogenesis; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2000113//negative regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part | GO:0000981//RNA polymerase II transcription factor activity, sequence-specific DNA binding; GO:0000988//transcription factor activity, protein binding; GO:0000989//transcription factor activity, transcription factor binding; GO:0001067//regulatory region nucleic acid binding; GO:0001076//transcription factor activity, RNA polymerase II transcription factor binding; GO:0001134//transcription factor activity, transcription factor recruiting; GO:0001135//transcription factor activity, RNA polymerase II transcription factor recruiting; GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0043565//sequence-specific DNA binding; GO:0044212//transcription regulatory region DNA binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
KEGG
K09422 | MYBP
NR
RWR93867.1 myb-related protein 305-like protein isoform X1 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9C9G7.1 RecName: Full=Transcription factor MYB62; AltName: Full=Myb-related protein 62; Short=AtMYB62 [Arabidopsis thaliana]
Biological context

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