Anise · mRNA

Chr10.g72784.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,159
bp
Chr10:42,810,546–42,811,867
genomic location
Record overview

Feature identity

Identifier
Chr10.g72784.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
1,159 bp
Genomic location
Chr10:42,810,546–42,811,867
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
3983.cassava4.1_012390m,K,[transcription factor]
Gene Ontology
transcription factor | GO:0006355//regulation of transcription, DNA-templated; GO:0006950//response to stress; GO:0008150//biological_process; GO:0009628//response to abiotic stimulus; GO:0009889//regulation of biosynthetic process; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0034059//response to anoxia; GO:0036293//response to decreased oxygen levels; GO:0050789//regulation of biological process; GO:0050793//regulation of developmental process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051239//regulation of multicellular organismal process; GO:0051252//regulation of RNA metabolic process; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0070482//response to oxygen levels; GO:0080090//regulation of primary metabolic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:2000026//regulation of multicellular organismal development; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2000280//regulation of root development; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003700//transcription factor activity, sequence-specific DNA binding
KEGG
K09286 | EREBP
NR
RWR94195.1 ethylene-responsive transcription factor ERF071 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
P42736.2 RecName: Full=Ethylene-responsive transcription factor RAP2-3; AltName: Full=Cadmium-induced protein AS30; AltName: Full=Ethylene response factor 72; Short=ERF72; AltName: Full=Ethylene-responsive element binding protein; Short=AtEBP; AltName: Full=Protein RELATED TO APETALA2 3; Short=Related to AP2 3 [Arabidopsis thaliana]
Biological context

Connected feature records

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