Feature identity
- Identifier
- scaffold190.g84196.m1
- Feature type
- mRNA
- Genome collection
- Anise
- Organism
- Persea americana-Anise
- Sequence length
- 737 bp
- Genomic location
- scaffold190:24,559–25,295
- Strand
- −
Anise · mRNA
scaffold190.g84196.m1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 737
- bp
- scaffold190:24,559–25,295
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: scaffold190.g84196
- eggNOG
- 37682.AFH89494,C,[Photosystem II (PSII) is a light-driven water plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1 D2 (PsbA PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex]
- KEGG
- K02706 | psbD
- NR
- AAS60047.1 photosystem II D2 protein, partial [Ecdeiocolea monostachya]
- Swiss-Prot
- Q0G9M4.1 RecName: Full=Photosystem II D2 protein; Short=PSII D2 protein; AltName: Full=Photosystem Q(A) protein [Liriodendron tulipifera]
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidescaffold190.g84196.m1-protein
derives_fromCDS
part_ofscaffold190.g84196.m1.cdsexon
part_ofscaffold190.g84196.m1.exon1