Anise · gene

Chr01.g00660

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

31,121
bp
Chr01:7,100,413–7,131,533
genomic location
Record overview

Feature identity

Identifier
Chr01.g00660
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
31,121 bp
Genomic location
Chr01:7,100,413–7,131,533
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
29760.VIT_03s0038g00160.t01,K,[Chromatin structure-remodeling complex subunit RSC1-like]
Gene Ontology
Chromatin structure-remodeling complex subunit RSC1-like | GO:0006323//DNA packaging; GO:0006325//chromatin organization; GO:0006333//chromatin assembly or disassembly; GO:0006338//chromatin remodeling; GO:0006342//chromatin silencing; GO:0006355//regulation of transcription, DNA-templated; GO:0006996//organelle organization; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0009791//post-embryonic development; GO:0009889//regulation of biosynthetic process; GO:0009890//negative regulation of biosynthetic process; GO:0009892//negative regulation of metabolic process; GO:0009987//cellular process; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010558//negative regulation of macromolecule biosynthetic process; GO:0010605//negative regulation of macromolecule metabolic process; GO:0010629//negative regulation of gene expression; GO:0010639//negative regulation of organelle organization; GO:0016043//cellular component organization; GO:0016458//gene silencing; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0022607//cellular component assembly; GO:0031056//regulation of histone modification; GO:0031057//negative regulation of histone modification; GO:0031323//regulation of cellular metabolic process; GO:0031324//negative regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031327//negative regulation of cellular biosynthetic process; GO:0031399//regulation of protein modification process; GO:0031400//negative regulation of protein modification process; GO:0031497//chromatin assembly; GO:0031507//heterochromatin assembly; GO:0032268//regulation of cellular protein metabolic process; GO:0032269//negative regulation of cellular protein metabolic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0033043//regulation of organelle organization; GO:0033044//regulation of chromosome organization; GO:0035065//regulation of histone acetylation; GO:0035067//negative regulation of histone acetylation; GO:0040029//regulation of gene expression, epigenetic; GO:0044085//cellular component biogenesis; GO:0045814//negative regulation of gene expression, epigenetic; GO:0045892//negative regulation of transcription, DNA-templated; GO:0045934//negative regulation of nucleobase-containing compound metabolic process; GO:0048519//negative regulation of biological process; GO:0048523//negative regulation of cellular process; GO:0048580//regulation of post-embryonic development; GO:0048583//regulation of response to stimulus; GO:0048856//anatomical structure development; GO:0050789//regulation of biological process; GO:0050793//regulation of developmental process; GO:0050794//regulation of cellular process; GO:0051128//regulation of cellular component organization; GO:0051129//negative regulation of cellular component organization; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051172//negative regulation of nitrogen compound metabolic process; GO:0051239//regulation of multicellular organismal process; GO:0051246//regulation of protein metabolic process; GO:0051248//negative regulation of protein metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051253//negative regulation of RNA metabolic process; GO:0051276//chromosome organization; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0070828//heterochromatin organization; GO:0071103//DNA conformation change; GO:0071840//cellular component organization or biogenesis; GO:0080090//regulation of primary metabolic process; GO:1901983//regulation of protein acetylation; GO:1901984//negative regulation of protein acetylation; GO:1902275//regulation of chromatin organization; GO:1902679//negative regulation of RNA biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903507//negative regulation of nucleic acid-templated transcription; GO:1905268//negative regulation of chromatin organization; GO:2000026//regulation of multicellular organismal development; GO:2000028//regulation of photoperiodism, flowering; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2000113//negative regulation of cellular macromolecule biosynthetic process; GO:2000241//regulation of reproductive process; GO:2000756//regulation of peptidyl-lysine acetylation; GO:2000757//negative regulation of peptidyl-lysine acetylation; GO:2001141//regulation of RNA biosynthetic process; GO:2001251//negative regulation of chromosome organization | GO:0000785//chromatin; GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005654//nucleoplasm; GO:0005677//chromatin silencing complex; GO:0005694//chromosome; GO:0017053//transcriptional repressor complex; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043228//non-membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043232//intracellular non-membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044427//chromosomal part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044451//nucleoplasm part; GO:0044464//cell part; GO:0070013//intracellular organelle lumen; GO:0090568//nuclear transcriptional repressor complex | GO:0000976//transcription regulatory region sequence-specific DNA binding; GO:0001067//regulatory region nucleic acid binding; GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003682//chromatin binding; GO:0003690//double-stranded DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0005515//protein binding; GO:0035064//methylated histone binding; GO:0042393//histone binding; GO:0043565//sequence-specific DNA binding; GO:0044212//transcription regulatory region DNA binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding; GO:1990837//sequence-specific double-stranded DNA binding
NR
RWR78807.1 chromatin remodeling protein EBS isoform X1 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
F4JL28.1 RecName: Full=Chromatin remodeling protein EBS; AltName: Full=Protein EARLY BOLTING IN SHORT DAYS [Arabidopsis thaliana]
Biological context

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