Chr07.g50786

Functional evidence

eggNOG

4432.XP_010261089.1,K,[DNA-directed RNA polymerase II]

Gene Ontology

DNA-directed RNA polymerase II | GO:0000288//nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; GO:0000956//nuclear-transcribed mRNA catabolic process; GO:0006139//nucleobase-containing compound metabolic process; GO:0006351//transcription, DNA-templated; GO:0006352//DNA-templated transcription, initiation; GO:0006366//transcription from RNA polymerase II promoter; GO:0006367//transcription initiation from RNA polymerase II promoter; GO:0006396//RNA processing; GO:0006397//mRNA processing; GO:0006401//RNA catabolic process; GO:0006402//mRNA catabolic process; GO:0006403//RNA localization; GO:0006405//RNA export from nucleus; GO:0006406//mRNA export from nucleus; GO:0006417//regulation of translation; GO:0006446//regulation of translational initiation; GO:0006611//protein export from nucleus; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006810//transport; GO:0006886//intracellular protein transport; GO:0006913//nucleocytoplasmic transport; GO:0006950//response to stress; GO:0008104//protein localization; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009056//catabolic process; GO:0009057//macromolecule catabolic process; GO:0009058//biosynthetic process; GO:0009059//macromolecule biosynthetic process; GO:0009266//response to temperature stimulus; GO:0009408//response to heat; GO:0009628//response to abiotic stimulus; GO:0009889//regulation of biosynthetic process; GO:0009891//positive regulation of biosynthetic process; GO:0009892//negative regulation of metabolic process; GO:0009893//positive regulation of metabolic process; GO:0009987//cellular process; GO:0010467//gene expression; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010557//positive regulation of macromolecule biosynthetic process; GO:0010604//positive regulation of macromolecule metabolic process; GO:0010605//negative regulation of macromolecule metabolic process; GO:0010608//posttranscriptional regulation of gene expression; GO:0010628//positive regulation of gene expression; GO:0010629//negative regulation of gene expression; GO:0015031//protein transport; GO:0015833//peptide transport; GO:0015931//nucleobase-containing compound transport; GO:0016043//cellular component organization; GO:0016070//RNA metabolic process; GO:0016071//mRNA metabolic process; GO:0018130//heterocycle biosynthetic process; GO:0019222//regulation of metabolic process; GO:0019438//aromatic compound biosynthetic process; GO:0019439//aromatic compound catabolic process; GO:0022607//cellular component assembly; GO:0022613//ribonucleoprotein complex biogenesis; GO:0022618//ribonucleoprotein complex assembly; GO:0031123//RNA 3'-end processing; GO:0031124//mRNA 3'-end processing; GO:0031323//regulation of cellular metabolic process; GO:0031325//positive regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031328//positive regulation of cellular biosynthetic process; GO:0031503//protein complex localization; GO:0031990//mRNA export from nucleus in response to heat stress; GO:0032268//regulation of cellular protein metabolic process; GO:0032270//positive regulation of cellular protein metabolic process; GO:0032774//RNA biosynthetic process; GO:0033036//macromolecule localization; GO:0033554//cellular response to stress; GO:0034248//regulation of cellular amide metabolic process; GO:0034250//positive regulation of cellular amide metabolic process; GO:0034402//recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex; GO:0034605//cellular response to heat; GO:0034613//cellular protein localization; GO:0034622//cellular macromolecular complex assembly; GO:0034641//cellular nitrogen compound metabolic process; GO:0034645//cellular macromolecule biosynthetic process; GO:0034654//nucleobase-containing compound biosynthetic process; GO:0034655//nucleobase-containing compound catabolic process; GO:0042886//amide transport; GO:0043170//macromolecule metabolic process; GO:0043933//macromolecular complex subunit organization; GO:0044085//cellular component biogenesis; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044248//cellular catabolic process; GO:0044249//cellular biosynthetic process; GO:0044260//cellular macromolecule metabolic process; GO:0044265//cellular macromolecule catabolic process; GO:0044270//cellular nitrogen compound catabolic process; GO:0044271//cellular nitrogen compound biosynthetic process; GO:0045184//establishment of protein localization; GO:0045727//positive regulation of translation; GO:0045948//positive regulation of translational initiation; GO:0046483//heterocycle metabolic process; GO:0046700//heterocycle catabolic process; GO:0046907//intracellular transport; GO:0048518//positive regulation of biological process; GO:0048519//negative regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0050657//nucleic acid transport; GO:0050658//RNA transport; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051028//mRNA transport; GO:0051168//nuclear export; GO:0051169//nuclear transport; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051173//positive regulation of nitrogen compound metabolic process; GO:0051179//localization; GO:0051234//establishment of localization; GO:0051236//establishment of RNA localization; GO:0051246//regulation of protein metabolic process; GO:0051247//positive regulation of protein metabolic process; GO:0051641//cellular localization; GO:0051649//establishment of localization in cell; GO:0051716//cellular response to stimulus; GO:0060255//regulation of macromolecule metabolic process; GO:0065003//macromolecular complex assembly; GO:0065007//biological regulation; GO:0070727//cellular macromolecule localization; GO:0071166//ribonucleoprotein complex localization; GO:0071426//ribonucleoprotein complex export from nucleus; GO:0071427//mRNA-containing ribonucleoprotein complex export from nucleus; GO:0071702//organic substance transport; GO:0071704//organic substance metabolic process; GO:0071705//nitrogen compound transport; GO:0071826//ribonucleoprotein complex subunit organization; GO:0071840//cellular component organization or biogenesis; GO:0080090//regulation of primary metabolic process; GO:0090304//nucleic acid metabolic process; GO:0097659//nucleic acid-templated transcription; GO:1901360//organic cyclic compound metabolic process; GO:1901361//organic cyclic compound catabolic process; GO:1901362//organic cyclic compound biosynthetic process; GO:1901575//organic substance catabolic process; GO:1901576//organic substance biosynthetic process; GO:2000112//regulation of cellular macromolecule biosynthetic process | GO:0000428//DNA-directed RNA polymerase complex; GO:0000932//P-body; GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005654//nucleoplasm; GO:0005665//DNA-directed RNA polymerase II, core complex; GO:0005737//cytoplasm; GO:0005829//cytosol; GO:0016591//DNA-directed RNA polymerase II, holoenzyme; GO:0016604//nuclear body; GO:0016607//nuclear speck; GO:0030880//RNA polymerase complex; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0032991//macromolecular complex; GO:0035770//ribonucleoprotein granule; GO:0036464//cytoplasmic ribonucleoprotein granule; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043228//non-membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043232//intracellular non-membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044444//cytoplasmic part; GO:0044446//intracellular organelle part; GO:0044451//nucleoplasm part; GO:0044464//cell part; GO:0055029//nuclear DNA-directed RNA polymerase complex; GO:0061695//transferase complex, transferring phosphorus-containing groups; GO:0070013//intracellular organelle lumen; GO:1902494//catalytic complex; GO:1990234//transferase complex; GO:1990904//ribonucleoprotein complex | GO:0003674//molecular_function; GO:0003824//catalytic activity; GO:0003899//DNA-directed 5'-3' RNA polymerase activity; GO:0005488//binding; GO:0005515//protein binding; GO:0016740//transferase activity; GO:0016772//transferase activity, transferring phosphorus-containing groups; GO:0016779//nucleotidyltransferase activity; GO:0031369//translation initiation factor binding; GO:0034062//5'-3' RNA polymerase activity; GO:0097747//RNA polymerase activity

KEGG

K03012 | RPB4, POLR2D

NR

RWR90490.1 DNA-directed RNA polymerase II subunit 4 [Cinnamomum micranthum f. kanehirae]

Swiss-Prot

O48890.1 RecName: Full=DNA-directed RNA polymerase II subunit 4; AltName: Full=15.9 kDa subunit of RNA polymerase II; AltName: Full=DNA-directed RNA polymerase II subunit D [Arabidopsis thaliana]