Anise · gene

Chr08.g62217

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

19,642
bp
Chr08:48,166,656–48,186,297
genomic location
Record overview

Feature identity

Identifier
Chr08.g62217
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
19,642 bp
Genomic location
Chr08:48,166,656–48,186,297
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010263289.1,B,[Telomere repeat-binding factor]
Gene Ontology
Telomere repeat-binding factor | - | GO:0000785//chromatin; GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005694//chromosome; GO:0005730//nucleolus; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043228//non-membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043232//intracellular non-membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044427//chromosomal part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0070013//intracellular organelle lumen | GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003690//double-stranded DNA binding; GO:0003691//double-stranded telomeric DNA binding; GO:0003697//single-stranded DNA binding; GO:0005488//binding; GO:0005515//protein binding; GO:0042162//telomeric DNA binding; GO:0042802//identical protein binding; GO:0042803//protein homodimerization activity; GO:0043047//single-stranded telomeric DNA binding; GO:0043565//sequence-specific DNA binding; GO:0046983//protein dimerization activity; GO:0097159//organic cyclic compound binding; GO:0098847//sequence-specific single stranded DNA binding; GO:1901363//heterocyclic compound binding
KEGG
K09422 | MYBP
NR
RWR86527.1 telomere repeat-binding factor 1-like protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q8VWK4.1 RecName: Full=Telomere repeat-binding factor 1; Short=AtTRB1; AltName: Full=MYB transcription factor [Arabidopsis thaliana]
Biological context

Connected feature records

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