Anise · gene

Chr08.g62488

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

2,196
bp
Chr08:51,287,356–51,289,551
genomic location
Record overview

Feature identity

Identifier
Chr08.g62488
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
2,196 bp
Genomic location
Chr08:51,287,356–51,289,551
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010277406.1,K,[Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs)]
Gene Ontology
Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs) | GO:0000003//reproduction; GO:0003006//developmental process involved in reproduction; GO:0006355//regulation of transcription, DNA-templated; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0009314//response to radiation; GO:0009416//response to light stimulus; GO:0009628//response to abiotic stimulus; GO:0009639//response to red or far red light; GO:0009640//photomorphogenesis; GO:0009642//response to light intensity; GO:0009646//response to absence of light; GO:0009647//skotomorphogenesis; GO:0009791//post-embryonic development; GO:0009889//regulation of biosynthetic process; GO:0010228//vegetative to reproductive phase transition of meristem; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0022414//reproductive process; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0048608//reproductive structure development; GO:0048731//system development; GO:0048856//anatomical structure development; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0060255//regulation of macromolecule metabolic process; GO:0061458//reproductive system development; GO:0065007//biological regulation; GO:0080090//regulation of primary metabolic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003680//AT DNA binding; GO:0003690//double-stranded DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0005515//protein binding; GO:0019899//enzyme binding; GO:0042826//histone deacetylase binding; GO:0043565//sequence-specific DNA binding; GO:0043621//protein self-association; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding; GO:1990837//sequence-specific double-stranded DNA binding
NR
RWR86648.1 putative DNA-binding protein ESCAROLA [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9SZ70.1 RecName: Full=AT-hook motif nuclear-localized protein 26 [Arabidopsis thaliana]
Biological context

Connected feature records

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