Feature identity
- Identifier
- PaHa11g21680.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 306 bp
- Genomic location
- 11:53,888,145–53,892,443
- Strand
- −
Hass · mRNA
PaHa11g21680.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 306
- bp
- 11:53,888,145–53,892,443
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g21680
- eggNOG
- Preferred name: ABC1K8 | Seed ortholog: 337451.A0A3S3NIW8 | COG: COG0661 | eggNOG OG: ABC1@131567|a-6
- Gene Ontology
- GO:0006979 response to oxidative stress; GO:0007623 circadian rhythm; GO:0009507 chloroplast; GO:0009536 plastid; GO:0009644 response to high light intensity; GO:0009941 chloroplast envelope; GO:0010150 leaf senescence; GO:0019216 regulation of lipid metabolic process; GO:0034599 cellular response to oxidative stress; GO:0042542 response to hydrogen peroxide; GO:0046686 response to cadmium ion; GO:0106310 protein serine kinase activity; GO:1901031 regulation of response to reactive oxygen species; GO:1990641 response to iron ion starvation
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g21680.1-protein
derives_frommRNAPaHa11g21680.1
mRNAPaHa11g21680.1
part_ofgenePaHa11g21680
CDS
part_ofPaHa11g21680.1-CDS-11-1787993825:53888145..53888154mRNAPaHa11g21680.1
CDS
part_ofPaHa11g21680.1-CDS-11-1787993825:53888322..53888401mRNAPaHa11g21680.1
CDS
part_ofPaHa11g21680.1-CDS-11-1787993825:53889467..53889577mRNAPaHa11g21680.1
CDS
part_ofPaHa11g21680.1-CDS-11-1787993825:53890368..53890466mRNAPaHa11g21680.1
CDS
part_ofPaHa11g21680.1-CDS-11-1787993825:53892438..53892443mRNAPaHa11g21680.1
exon
part_ofPaHa11g21680.1-exon-11-1787993825:53888145..53888154mRNAPaHa11g21680.1
exon
part_ofPaHa11g21680.1-exon-11-1787993825:53888322..53888401mRNAPaHa11g21680.1
exon
part_ofPaHa11g21680.1-exon-11-1787993825:53889467..53889577mRNAPaHa11g21680.1
exon
part_ofPaHa11g21680.1-exon-11-1787993825:53890368..53890466mRNAPaHa11g21680.1
exon
part_ofPaHa11g21680.1-exon-11-1787993825:53892438..53892443mRNAPaHa11g21680.1
