Feature identity
- Identifier
- PaHa11g16030.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 4,905 bp
- Genomic location
- 11:44,482,538–44,500,611
- Strand
- −
Hass · mRNA
PaHa11g16030.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 4,905
- bp
- 11:44,482,538–44,500,611
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g16030
- eggNOG
- Preferred name: HUA2 | Seed ortholog: 337451.A0A3S3NQY1 | COG: S | eggNOG OG: CID@131567|A-1*, CID@2759|AE-6, CID@35493|Di-10, PWWP@131567|A-1*, PWWP@2759|hk-17, PWWP@3193|ANg-21
- Gene Ontology
- GO:0003674 molecular_function; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006397 mRNA processing; GO:0009506 plasmodesma; GO:0009910 negative regulation of flower development; GO:0043481 anthocyanin accumulation in tissues in response to UV light; GO:0048497 maintenance of floral organ identity; GO:0048510 regulation of timing of transition from vegetative to reproductive phase
- KEGG
- EC: ec:2.1.1.37 | KO: K13167, K13191, K15560, K16847, K17398 | Pathway: 00270, 01100, 04148 | Module: M00035 | BRITE: 00001, 01000, 03000, 03021, 03032, 03036, 03041, 04990
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g16030.1-protein
derives_frommRNAPaHa11g16030.1
mRNAPaHa11g16030.1
part_ofgenePaHa11g16030
CDS
part_ofPaHa11g16030.1-CDS-11-1787993825:44482538..44482558mRNAPaHa11g16030.1
CDS
part_ofPaHa11g16030.1-CDS-11-1787993825:44482755..44482835mRNAPaHa11g16030.1
CDS
part_ofPaHa11g16030.1-CDS-11-1787993825:44482949..44482969mRNAPaHa11g16030.1
CDS
part_ofPaHa11g16030.1-CDS-11-1787993825:44483028..44483044mRNAPaHa11g16030.1
CDS
part_ofPaHa11g16030.1-CDS-11-1787993825:44483929..44484427mRNAPaHa11g16030.1
CDS
part_ofPaHa11g16030.1-CDS-11-1787993825:44484499..44485306mRNAPaHa11g16030.1
CDS
part_ofPaHa11g16030.1-CDS-11-1787993825:44489981..44490168mRNAPaHa11g16030.1
CDS
part_ofPaHa11g16030.1-CDS-11-1787993825:44490239..44490351mRNAPaHa11g16030.1
CDS
part_ofPaHa11g16030.1-CDS-11-1787993825:44490684..44490792mRNAPaHa11g16030.1
CDS
part_ofPaHa11g16030.1-CDS-11-1787993825:44492508..44493033mRNAPaHa11g16030.1
CDS
part_ofPaHa11g16030.1-CDS-11-1787993825:44493160..44495493mRNAPaHa11g16030.1
CDS
part_ofPaHa11g16030.1-CDS-11-1787993825:44500131..44500207mRNAPaHa11g16030.1
CDS
part_ofPaHa11g16030.1-CDS-11-1787993825:44500501..44500611mRNAPaHa11g16030.1
exon
part_ofPaHa11g16030.1-exon-11-1787993825:44482538..44482558mRNAPaHa11g16030.1
exon
part_ofPaHa11g16030.1-exon-11-1787993825:44482755..44482835mRNAPaHa11g16030.1
exon
part_ofPaHa11g16030.1-exon-11-1787993825:44482949..44482969mRNAPaHa11g16030.1
exon
part_ofPaHa11g16030.1-exon-11-1787993825:44483028..44483044mRNAPaHa11g16030.1
exon
part_ofPaHa11g16030.1-exon-11-1787993825:44483929..44484427mRNAPaHa11g16030.1
exon
part_ofPaHa11g16030.1-exon-11-1787993825:44484499..44485306mRNAPaHa11g16030.1
exon
part_ofPaHa11g16030.1-exon-11-1787993825:44489981..44490168mRNAPaHa11g16030.1
exon
part_ofPaHa11g16030.1-exon-11-1787993825:44490239..44490351mRNAPaHa11g16030.1
exon
part_ofPaHa11g16030.1-exon-11-1787993825:44490684..44490792mRNAPaHa11g16030.1
exon
part_ofPaHa11g16030.1-exon-11-1787993825:44492508..44493033mRNAPaHa11g16030.1
exon
part_ofPaHa11g16030.1-exon-11-1787993825:44493160..44495493mRNAPaHa11g16030.1
exon
part_ofPaHa11g16030.1-exon-11-1787993825:44500131..44500207mRNAPaHa11g16030.1
exon
part_ofPaHa11g16030.1-exon-11-1787993825:44500501..44500611mRNAPaHa11g16030.1
