Feature identity
- Identifier
- PaHa11g11410.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 351 bp
- Genomic location
- 11:37,448,840–37,449,287
- Strand
- −
Hass · mRNA
PaHa11g11410.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 351
- bp
- 11:37,448,840–37,449,287
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g11410
- eggNOG
- Preferred name: LOC100832419 | Seed ortholog: 337451.A0A443PNM9 | COG: COG0625 | eggNOG OG: GST_C@131567|CT-10, GST_N_3@131567|Y-5
- Gene Ontology
- GO:0000139 Golgi membrane; GO:0001516 prostaglandin biosynthetic process; GO:0003677 DNA binding; GO:0005515 protein binding; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005829 cytosol; GO:0006629 lipid metabolic process; GO:0016829 lyase activity; GO:0019371 cyclooxygenase pathway; GO:0020037 heme binding; GO:0035578 azurophil granule lumen; GO:0036134 12-hydroxyheptadecatrienoic acid synthase activity; GO:0042802 identical protein binding; GO:0043295 glutathione binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0046457 prostanoid biosynthetic process; GO:0046903 secretion; GO:0050220 prostaglandin-E synthase activity
- KEGG
- EC: ec:5.3.99.3 | KO: K05309 | Pathway: 00590, 01100 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g11410.1-protein
derives_frommRNAPaHa11g11410.1
mRNAPaHa11g11410.1
part_ofgenePaHa11g11410
CDS
part_ofPaHa11g11410.1-CDS-11-1787993825:37448840..37449000mRNAPaHa11g11410.1
CDS
part_ofPaHa11g11410.1-CDS-11-1787993825:37449098..37449287mRNAPaHa11g11410.1
exon
part_ofPaHa11g11410.1-exon-11-1787993825:37448840..37449000mRNAPaHa11g11410.1
exon
part_ofPaHa11g11410.1-exon-11-1787993825:37449098..37449287mRNAPaHa11g11410.1
