Anise · gene

Chr05.g42752

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

16,806
bp
Chr05:72,618,564–72,635,369
genomic location
Record overview

Feature identity

Identifier
Chr05.g42752
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
16,806 bp
Genomic location
Chr05:72,618,564–72,635,369
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
981085.XP_010106987.1,U,[Belongs to the syntaxin family]
Gene Ontology
Belongs to the syntaxin family | GO:0001101//response to acid chemical; GO:0006605//protein targeting; GO:0006612//protein targeting to membrane; GO:0006810//transport; GO:0006833//water transport; GO:0006886//intracellular protein transport; GO:0006887//exocytosis; GO:0006906//vesicle fusion; GO:0006950//response to stress; GO:0006952//defense response; GO:0006996//organelle organization; GO:0008104//protein localization; GO:0008150//biological_process; GO:0009605//response to external stimulus; GO:0009607//response to biotic stimulus; GO:0009620//response to fungus; GO:0009719//response to endogenous stimulus; GO:0009725//response to hormone; GO:0009737//response to abscisic acid; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010119//regulation of stomatal movement; GO:0010148//transpiration; GO:0015031//protein transport; GO:0015833//peptide transport; GO:0016043//cellular component organization; GO:0016050//vesicle organization; GO:0016192//vesicle-mediated transport; GO:0022406//membrane docking; GO:0031347//regulation of defense response; GO:0031348//negative regulation of defense response; GO:0032507//maintenance of protein location in cell; GO:0032940//secretion by cell; GO:0033036//macromolecule localization; GO:0033993//response to lipid; GO:0034613//cellular protein localization; GO:0042044//fluid transport; GO:0042221//response to chemical; GO:0042886//amide transport; GO:0043207//response to external biotic stimulus; GO:0045184//establishment of protein localization; GO:0045185//maintenance of protein location; GO:0046903//secretion; GO:0046907//intracellular transport; GO:0048278//vesicle docking; GO:0048284//organelle fusion; GO:0048519//negative regulation of biological process; GO:0048583//regulation of response to stimulus; GO:0048585//negative regulation of response to stimulus; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050832//defense response to fungus; GO:0050896//response to stimulus; GO:0051179//localization; GO:0051234//establishment of localization; GO:0051235//maintenance of location; GO:0051640//organelle localization; GO:0051641//cellular localization; GO:0051649//establishment of localization in cell; GO:0051651//maintenance of location in cell; GO:0051704//multi-organism process; GO:0051707//response to other organism; GO:0061024//membrane organization; GO:0061025//membrane fusion; GO:0065007//biological regulation; GO:0065008//regulation of biological quality; GO:0070727//cellular macromolecule localization; GO:0071702//organic substance transport; GO:0071705//nitrogen compound transport; GO:0071840//cellular component organization or biogenesis; GO:0072657//protein localization to membrane; GO:0072658//maintenance of protein location in membrane; GO:0072659//protein localization to plasma membrane; GO:0072660//maintenance of protein location in plasma membrane; GO:0080134//regulation of response to stress; GO:0090150//establishment of protein localization to membrane; GO:0090174//organelle membrane fusion; GO:0097305//response to alcohol; GO:0098542//defense response to other organism; GO:1901700//response to oxygen-containing compound; GO:1990778//protein localization to cell periphery | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005737//cytoplasm; GO:0005794//Golgi apparatus; GO:0005802//trans-Golgi network; GO:0005886//plasma membrane; GO:0005911//cell-cell junction; GO:0009504//cell plate; GO:0009506//plasmodesma; GO:0012505//endomembrane system; GO:0016020//membrane; GO:0016021//integral component of membrane; GO:0030054//cell junction; GO:0031201//SNARE complex; GO:0031224//intrinsic component of membrane; GO:0031984//organelle subcompartment; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044425//membrane part; GO:0044431//Golgi apparatus part; GO:0044444//cytoplasmic part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0055044//symplast; GO:0071944//cell periphery; GO:0098791//Golgi subcompartment; GO:0098796//membrane protein complex | GO:0000149//SNARE binding; GO:0003674//molecular_function; GO:0005488//binding; GO:0005515//protein binding; GO:0043495//protein anchor
KEGG
K08486 | STX1B_2_3
NR
RWR82127.1 nuclear transcription factor Y subunit A-10-like protein isoform X2 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9ZSD4.1 RecName: Full=Syntaxin-121; Short=AtSYP121; AltName: Full=Syntaxin-related protein At-Syr1 [Arabidopsis thaliana]
Biological context

Connected feature records

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