Anise · gene

Chr07.g54746

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

22,851
bp
Chr07:48,422,801–48,445,651
genomic location
Record overview

Feature identity

Identifier
Chr07.g54746
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
22,851 bp
Genomic location
Chr07:48,422,801–48,445,651
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
42345.XP_008784554.1,A,[RPR]
Gene Ontology
RPR | GO:0006139//nucleobase-containing compound metabolic process; GO:0006351//transcription, DNA-templated; GO:0006353//DNA-templated transcription, termination; GO:0006366//transcription from RNA polymerase II promoter; GO:0006369//termination of RNA polymerase II transcription; GO:0006378//mRNA polyadenylation; GO:0006379//mRNA cleavage; GO:0006396//RNA processing; GO:0006397//mRNA processing; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009058//biosynthetic process; GO:0009059//macromolecule biosynthetic process; GO:0009909//regulation of flower development; GO:0009911//positive regulation of flower development; GO:0009987//cellular process; GO:0010467//gene expression; GO:0016070//RNA metabolic process; GO:0016071//mRNA metabolic process; GO:0018130//heterocycle biosynthetic process; GO:0019438//aromatic compound biosynthetic process; GO:0031123//RNA 3'-end processing; GO:0031124//mRNA 3'-end processing; GO:0032774//RNA biosynthetic process; GO:0034641//cellular nitrogen compound metabolic process; GO:0034645//cellular macromolecule biosynthetic process; GO:0034654//nucleobase-containing compound biosynthetic process; GO:0043170//macromolecule metabolic process; GO:0043631//RNA polyadenylation; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044249//cellular biosynthetic process; GO:0044260//cellular macromolecule metabolic process; GO:0044271//cellular nitrogen compound biosynthetic process; GO:0046483//heterocycle metabolic process; GO:0048518//positive regulation of biological process; GO:0048580//regulation of post-embryonic development; GO:0048582//positive regulation of post-embryonic development; GO:0048831//regulation of shoot system development; GO:0050789//regulation of biological process; GO:0050793//regulation of developmental process; GO:0051094//positive regulation of developmental process; GO:0051239//regulation of multicellular organismal process; GO:0051240//positive regulation of multicellular organismal process; GO:0065007//biological regulation; GO:0071704//organic substance metabolic process; GO:0090304//nucleic acid metabolic process; GO:0090305//nucleic acid phosphodiester bond hydrolysis; GO:0090501//RNA phosphodiester bond hydrolysis; GO:0097659//nucleic acid-templated transcription; GO:1901360//organic cyclic compound metabolic process; GO:1901362//organic cyclic compound biosynthetic process; GO:1901576//organic substance biosynthetic process; GO:2000026//regulation of multicellular organismal development; GO:2000241//regulation of reproductive process; GO:2000243//positive regulation of reproductive process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005654//nucleoplasm; GO:0005737//cytoplasm; GO:0005849//mRNA cleavage factor complex; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044451//nucleoplasm part; GO:0044464//cell part; GO:0070013//intracellular organelle lumen | GO:0000993//RNA polymerase II core binding; GO:0001098//basal transcription machinery binding; GO:0001099//basal RNA polymerase II transcription machinery binding; GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003723//RNA binding; GO:0003729//mRNA binding; GO:0005488//binding; GO:0005515//protein binding; GO:0019899//enzyme binding; GO:0043175//RNA polymerase core enzyme binding; GO:0044877//macromolecular complex binding; GO:0070063//RNA polymerase binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
KEGG
K14400 | PCF11
NR
RWR85110.1 polyadenylation and cleavage factor 4 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q0WPF2.1 RecName: Full=Polyadenylation and cleavage factor homolog 4 [Arabidopsis thaliana]
Biological context

Connected feature records

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