Anise · gene

Chr08.g58483

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

35,678
bp
Chr08:9,714,920–9,750,597
genomic location
Record overview

Feature identity

Identifier
Chr08.g58483
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
35,678 bp
Genomic location
Chr08:9,714,920–9,750,597
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010260322.1,A,[DDB1- and CUL4-associated factor]
Gene Ontology
DDB1- and CUL4-associated factor | GO:0000462//maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0006139//nucleobase-containing compound metabolic process; GO:0006364//rRNA processing; GO:0006396//RNA processing; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009987//cellular process; GO:0010467//gene expression; GO:0016070//RNA metabolic process; GO:0016072//rRNA metabolic process; GO:0022613//ribonucleoprotein complex biogenesis; GO:0030490//maturation of SSU-rRNA; GO:0034470//ncRNA processing; GO:0034641//cellular nitrogen compound metabolic process; GO:0034660//ncRNA metabolic process; GO:0042254//ribosome biogenesis; GO:0042274//ribosomal small subunit biogenesis; GO:0043170//macromolecule metabolic process; GO:0044085//cellular component biogenesis; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0046483//heterocycle metabolic process; GO:0071704//organic substance metabolic process; GO:0071840//cellular component organization or biogenesis; GO:0090304//nucleic acid metabolic process; GO:1901360//organic cyclic compound metabolic process | GO:0000151//ubiquitin ligase complex; GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005730//nucleolus; GO:0030684//preribosome; GO:0031461//cullin-RING ubiquitin ligase complex; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0032040//small-subunit processome; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043228//non-membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043232//intracellular non-membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0070013//intracellular organelle lumen; GO:0080008//Cul4-RING E3 ubiquitin ligase complex; GO:1902494//catalytic complex; GO:1990234//transferase complex; GO:1990904//ribonucleoprotein complex | -
KEGG
K11806 | WDSOF1
NR
RWR87711.1 DDB1- and CUL4-associated factor 13 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q7ZYQ6.1 RecName: Full=DDB1- and CUL4-associated factor 13; AltName: Full=WD repeat and SOF domain-containing protein 1 [Xenopus laevis]
Biological context

Connected feature records

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