Anise · gene

Chr10.g72685

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

10,336
bp
Chr10:41,437,914–41,448,249
genomic location
Record overview

Feature identity

Identifier
Chr10.g72685
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
10,336 bp
Genomic location
Chr10:41,437,914–41,448,249
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010241530.1,O,[RING finger and CHY zinc finger domain-containing protein]
Gene Ontology
RING finger and CHY zinc finger domain-containing protein | GO:0000731//DNA synthesis involved in DNA repair; GO:0002831//regulation of response to biotic stimulus; GO:0002832//negative regulation of response to biotic stimulus; GO:0006139//nucleobase-containing compound metabolic process; GO:0006259//DNA metabolic process; GO:0006281//DNA repair; GO:0006301//postreplication repair; GO:0006464//cellular protein modification process; GO:0006508//proteolysis; GO:0006511//ubiquitin-dependent protein catabolic process; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006950//response to stress; GO:0006974//cellular response to DNA damage stimulus; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009056//catabolic process; GO:0009057//macromolecule catabolic process; GO:0009058//biosynthetic process; GO:0009059//macromolecule biosynthetic process; GO:0009893//positive regulation of metabolic process; GO:0009894//regulation of catabolic process; GO:0009896//positive regulation of catabolic process; GO:0009987//cellular process; GO:0010604//positive regulation of macromolecule metabolic process; GO:0016567//protein ubiquitination; GO:0018130//heterocycle biosynthetic process; GO:0019222//regulation of metabolic process; GO:0019438//aromatic compound biosynthetic process; GO:0019538//protein metabolic process; GO:0019941//modification-dependent protein catabolic process; GO:0019985//translesion synthesis; GO:0030162//regulation of proteolysis; GO:0030163//protein catabolic process; GO:0031323//regulation of cellular metabolic process; GO:0031325//positive regulation of cellular metabolic process; GO:0031329//regulation of cellular catabolic process; GO:0031331//positive regulation of cellular catabolic process; GO:0031347//regulation of defense response; GO:0031348//negative regulation of defense response; GO:0031396//regulation of protein ubiquitination; GO:0031398//positive regulation of protein ubiquitination; GO:0031399//regulation of protein modification process; GO:0031401//positive regulation of protein modification process; GO:0032101//regulation of response to external stimulus; GO:0032102//negative regulation of response to external stimulus; GO:0032268//regulation of cellular protein metabolic process; GO:0032270//positive regulation of cellular protein metabolic process; GO:0032434//regulation of proteasomal ubiquitin-dependent protein catabolic process; GO:0032436//positive regulation of proteasomal ubiquitin-dependent protein catabolic process; GO:0032446//protein modification by small protein conjugation; GO:0033554//cellular response to stress; GO:0034641//cellular nitrogen compound metabolic process; GO:0034645//cellular macromolecule biosynthetic process; GO:0034654//nucleobase-containing compound biosynthetic process; GO:0036211//protein modification process; GO:0042176//regulation of protein catabolic process; GO:0043170//macromolecule metabolic process; GO:0043412//macromolecule modification; GO:0043632//modification-dependent macromolecule catabolic process; GO:0043900//regulation of multi-organism process; GO:0043901//negative regulation of multi-organism process; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044248//cellular catabolic process; GO:0044249//cellular biosynthetic process; GO:0044257//cellular protein catabolic process; GO:0044260//cellular macromolecule metabolic process; GO:0044265//cellular macromolecule catabolic process; GO:0044267//cellular protein metabolic process; GO:0044271//cellular nitrogen compound biosynthetic process; GO:0045732//positive regulation of protein catabolic process; GO:0045862//positive regulation of proteolysis; GO:0046483//heterocycle metabolic process; GO:0048518//positive regulation of biological process; GO:0048519//negative regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0048583//regulation of response to stimulus; GO:0048585//negative regulation of response to stimulus; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051173//positive regulation of nitrogen compound metabolic process; GO:0051246//regulation of protein metabolic process; GO:0051247//positive regulation of protein metabolic process; GO:0051603//proteolysis involved in cellular protein catabolic process; GO:0051716//cellular response to stimulus; GO:0051865//protein autoubiquitination; GO:0060255//regulation of macromolecule metabolic process; GO:0061136//regulation of proteasomal protein catabolic process; GO:0065007//biological regulation; GO:0070647//protein modification by small protein conjugation or removal; GO:0070987//error-free translesion synthesis; GO:0071704//organic substance metabolic process; GO:0071897//DNA biosynthetic process; GO:0080090//regulation of primary metabolic process; GO:0080134//regulation of response to stress; GO:0090304//nucleic acid metabolic process; GO:1900424//regulation of defense response to bacterium; GO:1900425//negative regulation of defense response to bacterium; GO:1901360//organic cyclic compound metabolic process; GO:1901362//organic cyclic compound biosynthetic process; GO:1901483//regulation of transcription factor catabolic process; GO:1901485//positive regulation of transcription factor catabolic process; GO:1901564//organonitrogen compound metabolic process; GO:1901565//organonitrogen compound catabolic process; GO:1901575//organic substance catabolic process; GO:1901576//organic substance biosynthetic process; GO:1901800//positive regulation of proteasomal protein catabolic process; GO:1903050//regulation of proteolysis involved in cellular protein catabolic process; GO:1903052//positive regulation of proteolysis involved in cellular protein catabolic process; GO:1903320//regulation of protein modification by small protein conjugation or removal; GO:1903322//positive regulation of protein modification by small protein conjugation or removal; GO:1903362//regulation of cellular protein catabolic process; GO:1903364//positive regulation of cellular protein catabolic process; GO:2000058//regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process; GO:2000060//positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process | GO:0000151//ubiquitin ligase complex; GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005654//nucleoplasm; GO:0005737//cytoplasm; GO:0005829//cytosol; GO:0016604//nuclear body; GO:0016607//nuclear speck; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044444//cytoplasmic part; GO:0044446//intracellular organelle part; GO:0044451//nucleoplasm part; GO:0044464//cell part; GO:0070013//intracellular organelle lumen; GO:1902494//catalytic complex; GO:1990234//transferase complex | GO:0002039//p53 binding; GO:0003674//molecular_function; GO:0003824//catalytic activity; GO:0004842//ubiquitin-protein transferase activity; GO:0005488//binding; GO:0005515//protein binding; GO:0008134//transcription factor binding; GO:0008270//zinc ion binding; GO:0016740//transferase activity; GO:0019787//ubiquitin-like protein transferase activity; GO:0042802//identical protein binding; GO:0042803//protein homodimerization activity; GO:0043167//ion binding; GO:0043169//cation binding; GO:0046872//metal ion binding; GO:0046914//transition metal ion binding; GO:0046983//protein dimerization activity
KEGG
K10144 | RCHY1, PIRH2
NR
RWR94116.1 E3 ubiquitin-protein ligase MIEL1 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q8VZK0.1 RecName: Full=E3 ubiquitin-protein ligase MIEL1; AltName: Full=MYB30-interacting E3 ligase 1; AltName: Full=Pirh2-like protein 1; Short=AtPILP1; AltName: Full=RING-type E3 ubiquitin transferase MIEL1 [Arabidopsis thaliana]
Biological context

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