Feature identity
- Identifier
- PaHa08g12780.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,314 bp
- Genomic location
- 8:39,890,563–39,920,757
- Strand
- −
Hass · mRNA
PaHa08g12780.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,314
- bp
- 8:39,890,563–39,920,757
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g12780
- eggNOG
- Preferred name: ACX4 | Seed ortholog: 337451.A0A3S3P9U6 | COG: COG1960 | eggNOG OG: Acyl-CoA_dh_1@131567|aE-15, Acyl-CoA_dh_1@35493|abz-38, Acyl-CoA_dh_M@131567|IZ-12, Acyl-CoA_dh_M@3193|bmD-35, Acyl-CoA_dh_N@131567|Cf-8
- Gene Ontology
- GO:0003997 acyl-CoA oxidase activity; GO:0005777 peroxisome; GO:0005829 cytosol; GO:0006635 fatty acid beta-oxidation; GO:0009507 chloroplast; GO:0009514 glyoxysome; GO:0009793 embryo development ending in seed dormancy; GO:0046459 short-chain fatty acid metabolic process; GO:1901149 salicylic acid binding
- KEGG
- EC: ec:1.3.3.6 | KO: K00232 | Pathway: 00071, 00410, 00592, 00640, 01040, 01100, 01110, 01200, 01212, 04146 | Module: M00013, M00087, M00113, M00861 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g12780.1-protein
derives_frommRNAPaHa08g12780.1
mRNAPaHa08g12780.1
part_ofgenePaHa08g12780
CDS
part_ofPaHa08g12780.1-CDS-8-1787993825:39890563..39890694mRNAPaHa08g12780.1
CDS
part_ofPaHa08g12780.1-CDS-8-1787993825:39897935..39898027mRNAPaHa08g12780.1
CDS
part_ofPaHa08g12780.1-CDS-8-1787993825:39898206..39898377mRNAPaHa08g12780.1
CDS
part_ofPaHa08g12780.1-CDS-8-1787993825:39898464..39898540mRNAPaHa08g12780.1
CDS
part_ofPaHa08g12780.1-CDS-8-1787993825:39906540..39906699mRNAPaHa08g12780.1
CDS
part_ofPaHa08g12780.1-CDS-8-1787993825:39916005..39916114mRNAPaHa08g12780.1
CDS
part_ofPaHa08g12780.1-CDS-8-1787993825:39916211..39916270mRNAPaHa08g12780.1
CDS
part_ofPaHa08g12780.1-CDS-8-1787993825:39916368..39916441mRNAPaHa08g12780.1
CDS
part_ofPaHa08g12780.1-CDS-8-1787993825:39916573..39916696mRNAPaHa08g12780.1
CDS
part_ofPaHa08g12780.1-CDS-8-1787993825:39916784..39916861mRNAPaHa08g12780.1
CDS
part_ofPaHa08g12780.1-CDS-8-1787993825:39917124..39917230mRNAPaHa08g12780.1
CDS
part_ofPaHa08g12780.1-CDS-8-1787993825:39920631..39920757mRNAPaHa08g12780.1
exon
part_ofPaHa08g12780.1-exon-8-1787993825:39890563..39890694mRNAPaHa08g12780.1
exon
part_ofPaHa08g12780.1-exon-8-1787993825:39897935..39898027mRNAPaHa08g12780.1
exon
part_ofPaHa08g12780.1-exon-8-1787993825:39898206..39898377mRNAPaHa08g12780.1
exon
part_ofPaHa08g12780.1-exon-8-1787993825:39898464..39898540mRNAPaHa08g12780.1
exon
part_ofPaHa08g12780.1-exon-8-1787993825:39906540..39906699mRNAPaHa08g12780.1
exon
part_ofPaHa08g12780.1-exon-8-1787993825:39916005..39916114mRNAPaHa08g12780.1
exon
part_ofPaHa08g12780.1-exon-8-1787993825:39916211..39916270mRNAPaHa08g12780.1
exon
part_ofPaHa08g12780.1-exon-8-1787993825:39916368..39916441mRNAPaHa08g12780.1
exon
part_ofPaHa08g12780.1-exon-8-1787993825:39916573..39916696mRNAPaHa08g12780.1
exon
part_ofPaHa08g12780.1-exon-8-1787993825:39916784..39916861mRNAPaHa08g12780.1
exon
part_ofPaHa08g12780.1-exon-8-1787993825:39917124..39917230mRNAPaHa08g12780.1
exon
part_ofPaHa08g12780.1-exon-8-1787993825:39920631..39920757mRNAPaHa08g12780.1
