Feature identity
- Identifier
- Pa03g2548.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 681 bp
- Genomic location
- Pa03:64,361,753–64,363,127
- Strand
- +
West Indian T2T · mRNA
Pa03g2548.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 681
- bp
- Pa03:64,361,753–64,363,127
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa03g2548
- eggNOG
- Preferred name: WOX2 | Seed ortholog: 337451.A0A3S3NC77 | COG: S | eggNOG OG: Homeodomain@131567|RH-16, Homeodomain@2759|XV-17!, Homeodomain@33090|BEn-23, Homeodomain@3398|ByA-25
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0008284 positive regulation of cell population proliferation; GO:0009880 embryonic pattern specification; GO:0009942 longitudinal axis specification; GO:0010654 apical cell fate commitment; GO:0048825 cotyledon development; GO:0090451 cotyledon boundary formation
- KEGG
- KO: K09299, K09357, K09378, K09379, K09380, K23560 | Pathway: 04550, 05202, 05206, 05215 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa03g2548.1-protein
derives_frommRNAPa03g2548.1
mRNAPa03g2548.1
part_ofgenePa03g2548
exon
part_ofPa03g2548.1:1mRNAPa03g2548.1
exon
part_ofPa03g2548.1:2mRNAPa03g2548.1
CDS
part_ofPa03g2548.1:cdsmRNAPa03g2548.1
