Pa02g4956.1

West Indian T2T · mRNA

Pa02g4956.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

4,089
bp
Pa02:102,168,362–102,200,498
genomic location
Record overview

Feature identity

Identifier
Pa02g4956.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
4,089 bp
Genomic location
Pa02:102,168,362–102,200,498
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: Pa02g4956

eggNOG
Preferred name: TAF2 | Seed ortholog: 337451.A0A3S3M8A4 | COG: COG0308 | eggNOG OG: Peptidase_M1@131567|Ab-7
Gene Ontology
GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding; GO:0005634 nucleus; GO:0006352 DNA-templated transcription initiation; GO:0006366 transcription by RNA polymerase II; GO:0006367 transcription initiation at RNA polymerase II promoter; GO:0009506 plasmodesma; GO:0009792 embryo development ending in birth or egg hatching; GO:0016251 RNA polymerase II general transcription initiation factor activity; GO:0017025 TBP-class protein binding; GO:0051123 RNA polymerase II preinitiation complex assembly; GO:0140296 general transcription initiation factor binding
KEGG
KO: K03128 | Pathway: 03022 | BRITE: 00001, 01002, 03021, 03036
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.

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