Feature identity
- Identifier
- Pa03g0706.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 333 bp
- Genomic location
- Pa03:10,340,010–10,342,850
- Strand
- +
West Indian T2T · mRNA
Pa03g0706.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 333
- bp
- Pa03:10,340,010–10,342,850
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa03g0706
- eggNOG
- Preferred name: LOC101782188 | Seed ortholog: 42345.A0A2H3Z249 | COG: COG1594 | eggNOG OG: TFIIS_C@131567|Ar-7
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003899 DNA-directed RNA polymerase activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005666 RNA polymerase III complex; GO:0005829 cytosol; GO:0006354 DNA-templated transcription elongation; GO:0006355 regulation of DNA-templated transcription; GO:0006383 transcription by RNA polymerase III; GO:0006384 transcription initiation at RNA polymerase III promoter; GO:0006386 termination of RNA polymerase III transcription; GO:0008270 zinc ion binding; GO:0042780 tRNA 3'-end processing; GO:0042797 tRNA transcription by RNA polymerase III; GO:0061484 hematopoietic stem cell homeostasis
- KEGG
- KO: K03019 | Pathway: 03020 | BRITE: 00001, 01611, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa03g0706.1-protein
derives_frommRNAPa03g0706.1
mRNAPa03g0706.1
part_ofgenePa03g0706
exon
part_ofPa03g0706.1:1mRNAPa03g0706.1
exon
part_ofPa03g0706.1:2mRNAPa03g0706.1
exon
part_ofPa03g0706.1:3mRNAPa03g0706.1
CDS
part_ofPa03g0706.1:cdsmRNAPa03g0706.1
