Feature identity
- Identifier
- PaHa01g22610.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 627 bp
- Genomic location
- 1:54,297,232–54,298,548
- Strand
- +
Hass · mRNA
PaHa01g22610.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 627
- bp
- 1:54,297,232–54,298,548
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g22610
- eggNOG
- Preferred name: LOC110793977 | Seed ortholog: 337451.A0A443NFM7 | COG: COG2132 | eggNOG OG: Cu-oxidase@131567|A-1, Cu-oxidase@1437183|Bot-22, Cu-oxidase@2759|v-6, Cu-oxidase@3193|ALV-18, Cu-oxidase@3398|Auk-20, Cu-oxidase@35493|Kt-12, Cu-oxidase_2@1437183|UU-16, Cu-oxidase_2@2759|B-2!, Cu-oxidase_2@3193|EO-11, Cu-oxidase_2@3398|LU-14, Cu-oxidase_3@131567|C-2!, Cu-oxidase_3@1437183|we-19, Cu-oxidase_3@3193|Wt-16, Cu-oxidase_3@3398|da-17
- Gene Ontology
- GO:0004097 catechol oxidase activity; GO:0004322 ferroxidase activity; GO:0004503 tyrosinase activity; GO:0005576 extracellular region; GO:0008447 L-ascorbate oxidase activity; GO:0009897 external side of plasma membrane; GO:0009986 cell surface; GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor; GO:0040003 chitin-based cuticle development; GO:0045178 basal part of cell; GO:0055070 copper ion homeostasis; GO:0098711 iron ion import across plasma membrane
- KEGG
- EC: ec:1.10.3.2, ec:1.10.3.3 | KO: K19791 | Pathway: 00053, 01100 | BRITE: 00001, 02000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g22610.1-protein
derives_frommRNAPaHa01g22610.1
mRNAPaHa01g22610.1
part_ofgenePaHa01g22610
CDS
part_ofPaHa01g22610.1-CDS-1-1787993825:54297232..54297370mRNAPaHa01g22610.1
CDS
part_ofPaHa01g22610.1-CDS-1-1787993825:54297612..54297700mRNAPaHa01g22610.1
CDS
part_ofPaHa01g22610.1-CDS-1-1787993825:54297961..54298060mRNAPaHa01g22610.1
CDS
part_ofPaHa01g22610.1-CDS-1-1787993825:54298250..54298548mRNAPaHa01g22610.1
exon
part_ofPaHa01g22610.1-exon-1-1787993825:54297232..54297370mRNAPaHa01g22610.1
exon
part_ofPaHa01g22610.1-exon-1-1787993825:54297612..54297700mRNAPaHa01g22610.1
exon
part_ofPaHa01g22610.1-exon-1-1787993825:54297961..54298060mRNAPaHa01g22610.1
exon
part_ofPaHa01g22610.1-exon-1-1787993825:54298250..54298548mRNAPaHa01g22610.1
