Feature identity
- Identifier
- Pa08g0034.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,959 bp
- Genomic location
- Pa08:629,436–640,691
- Strand
- −
West Indian T2T · mRNA
Pa08g0034.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,959
- bp
- Pa08:629,436–640,691
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa08g0034
- eggNOG
- Preferred name: LOC104610318 | Seed ortholog: 337451.A0A443P8Y7 | COG: S | eggNOG OG: BES1_N@131567|A-1*, BES1_N@3398|U-6, BES1_N@35493|H-4, Glyco_hydro_14@131567|AV-8, Glyco_hydro_14@33090|Ce-12
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0048831 regulation of shoot system development
- KEGG
- EC: ec:3.2.1.2 | KO: K01177 | Pathway: 00500, 01100, 01110 | BRITE: 00001, 01000 | CAZy: GH14|Glycoside Hydrolase Family 14.
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa08g0034.1-protein
derives_frommRNAPa08g0034.1
mRNAPa08g0034.1
part_ofgenePa08g0034
exon
part_ofPa08g0034.1:10mRNAPa08g0034.1
CDS
part_ofPa08g0034.1:cdsmRNAPa08g0034.1
exon
part_ofPa08g0034.3:1mRNAPa08g0034.1
exon
part_ofPa08g0034.3:2mRNAPa08g0034.1
exon
part_ofPa08g0034.3:3mRNAPa08g0034.1
exon
part_ofPa08g0034.3:4mRNAPa08g0034.1
exon
part_ofPa08g0034.3:5mRNAPa08g0034.1
exon
part_ofPa08g0034.3:6mRNAPa08g0034.1
exon
part_ofPa08g0034.3:7mRNAPa08g0034.1
exon
part_ofPa08g0034.3:8mRNAPa08g0034.1
exon
part_ofPa08g0034.3:9mRNAPa08g0034.1
