Feature identity
- Identifier
- Pa08g0169.2
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 621 bp
- Genomic location
- Pa08:2,499,888–2,503,471
- Strand
- +
West Indian T2T · mRNA
Pa08g0169.2
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 621
- bp
- Pa08:2,499,888–2,503,471
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa08g0169
- eggNOG
- Preferred name: WRKY12 | Seed ortholog: 337451.A0A3S3PBP6 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|VE-17, WRKY@3398|fr-19
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009832 plant-type cell wall biogenesis; GO:0043565 sequence-specific DNA binding
- KEGG
- EC: ec:2.4.1.260 | KO: K03847 | Pathway: 00510, 00513, 01100 | Module: M00055 | BRITE: 00001, 01000, 01003
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa08g0169.2-protein
derives_frommRNAPa08g0169.2
exon
part_ofPa08g0169.1:2mRNAPa08g0169.2
exon
part_ofPa08g0169.1:3mRNAPa08g0169.2
exon
part_ofPa08g0169.1:4mRNAPa08g0169.2
mRNAPa08g0169.2
part_ofgenePa08g0169
exon
part_ofPa08g0169.2:5mRNAPa08g0169.2
CDS
part_ofPa08g0169.2:cdsmRNAPa08g0169.2
