Feature identity
- Identifier
- Pa08g0609.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 3,336 bp
- Genomic location
- Pa08:8,884,590–8,919,435
- Strand
- −
West Indian T2T · mRNA
Pa08g0609.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,336
- bp
- Pa08:8,884,590–8,919,435
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa08g0609
- eggNOG
- Preferred name: LOC123091203 | Seed ortholog: 337451.A0A443PA57 | COG: S | eggNOG OG: TFIIIC_delta@2759|A-1, WD40@131567|ko-16, WD40@2759|ANH-18
- Gene Ontology
- GO:0000995 RNA polymerase III general transcription initiation factor activity; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006383 transcription by RNA polymerase III; GO:0006384 transcription initiation at RNA polymerase III promoter; GO:0008150 biological_process; GO:0036408 histone H3K14 acetyltransferase activity; GO:0042791 5S class rRNA transcription by RNA polymerase III; GO:0042797 tRNA transcription by RNA polymerase III; GO:0061733 protein-lysine-acetyltransferase activity
- KEGG
- EC: ec:2.3.1.48, ec:2.7.11.1, ec:3.2.1.50 | KO: K01205, K07204, K08333, K10260, K11127, K11310, K11803, K12857, K14299, K14793, K24738 | Pathway: 00531, 01100, 03013, 03040, 04120, 04136, 04140, 04142, 04150, 04213 | Module: M00078 | BRITE: 00001, 01000, 01001, 03009, 03019, 03021, 03032, 03036, 03041, 04121, 04131, 04147
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa08g0609.1-protein
derives_frommRNAPa08g0609.1
mRNAPa08g0609.1
part_ofgenePa08g0609
exon
part_ofPa08g0609.1:1mRNAPa08g0609.1
exon
part_ofPa08g0609.1:10mRNAPa08g0609.1
exon
part_ofPa08g0609.1:11mRNAPa08g0609.1
exon
part_ofPa08g0609.1:12mRNAPa08g0609.1
exon
part_ofPa08g0609.1:13mRNAPa08g0609.1
exon
part_ofPa08g0609.1:14mRNAPa08g0609.1
exon
part_ofPa08g0609.1:15mRNAPa08g0609.1
exon
part_ofPa08g0609.1:16mRNAPa08g0609.1
exon
part_ofPa08g0609.1:17mRNAPa08g0609.1
exon
part_ofPa08g0609.1:18mRNAPa08g0609.1
exon
part_ofPa08g0609.1:19mRNAPa08g0609.1
exon
part_ofPa08g0609.1:2mRNAPa08g0609.1
exon
part_ofPa08g0609.1:20mRNAPa08g0609.1
exon
part_ofPa08g0609.1:3mRNAPa08g0609.1
exon
part_ofPa08g0609.1:4mRNAPa08g0609.1
exon
part_ofPa08g0609.1:5mRNAPa08g0609.1
exon
part_ofPa08g0609.1:6mRNAPa08g0609.1
exon
part_ofPa08g0609.1:7mRNAPa08g0609.1
exon
part_ofPa08g0609.1:8mRNAPa08g0609.1
exon
part_ofPa08g0609.1:9mRNAPa08g0609.1
CDS
part_ofPa08g0609.1:cdsmRNAPa08g0609.1
