Feature identity
- Identifier
- Pa08g0357.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 2,331 bp
- Genomic location
- Pa08:5,094,868–5,097,198
- Strand
- −
West Indian T2T · mRNA
Pa08g0357.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,331
- bp
- Pa08:5,094,868–5,097,198
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa08g0357
- eggNOG
- Preferred name: SCL6 | Seed ortholog: 337451.A0A443P9Q7 | COG: S | eggNOG OG: GRAS@131567|n-8, GRAS@3193|CH-12, GRAS@3398|JO-16, GRAS@58023|DN-13
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0030154 cell differentiation; GO:0048768 root hair cell tip growth; GO:0051301 cell division
- KEGG
- KO: K27747 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa08g0357.1-protein
derives_frommRNAPa08g0357.1
mRNAPa08g0357.1
part_ofgenePa08g0357
exon
part_ofPa08g0357.1:1mRNAPa08g0357.1
CDS
part_ofPa08g0357.1:cdsmRNAPa08g0357.1
