Pa08g1125.1

West Indian T2T · mRNA

Pa08g1125.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,962
bp
Pa08:23,007,969–23,017,759
genomic location
Record overview

Feature identity

Identifier
Pa08g1125.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
1,962 bp
Genomic location
Pa08:23,007,969–23,017,759
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: Pa08g1125

eggNOG
Preferred name: LOC100832047 | Seed ortholog: 337451.A0A3S3NRL5 | COG: S | eggNOG OG: Rad21_Rec8_N@131567|A-1*, Rad21_Rec8_N@2759|Ae-8, Rad21_Rec8_N@33090|NV-16, Rad21_Rec8_N@3398|SE-18
Gene Ontology
GO:0000278 mitotic cell cycle; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003674 molecular_function; GO:0003682 chromatin binding; GO:0003684 damaged DNA binding; GO:0003690 double-stranded DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0009555 pollen development; GO:0009561 megagametogenesis; GO:0019901 protein kinase binding; GO:0043565 sequence-specific DNA binding; GO:0061776 ATP-dependent topological DNA co-entrapment activity; GO:0106222 lncRNA binding; GO:0140297 DNA-binding transcription factor binding
KEGG
KO: K06670 | Pathway: 04110, 04111, 04113 | BRITE: 00001, 03036
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.

Tripal Logo
Tripal Logo
Tripal Logo

© 2026 PerseaDB. How to cite PerseaDB 琼ICP备2026011956号