Feature identity
- Identifier
- Pa10g1034.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,083 bp
- Genomic location
- Pa10:30,703,667–30,704,996
- Strand
- −
West Indian T2T · mRNA
Pa10g1034.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,083
- bp
- Pa10:30,703,667–30,704,996
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa10g1034
- eggNOG
- Preferred name: MYB39 | Seed ortholog: 337451.A0A443PS36 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3193|HJd-40, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@3398|Vkj-52, Myb_DNA-binding@35493|GNw-39, Myb_DNA-binding@58023|IIy-41
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006970 response to osmotic stress; GO:0009611 response to wounding; GO:0009737 response to abscisic acid
- KEGG
- KO: K09422 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa10g1034.1-protein
derives_frommRNAPa10g1034.1
mRNAPa10g1034.1
part_ofgenePa10g1034
exon
part_ofPa10g1034.1:1mRNAPa10g1034.1
exon
part_ofPa10g1034.1:2mRNAPa10g1034.1
exon
part_ofPa10g1034.1:3mRNAPa10g1034.1
CDS
part_ofPa10g1034.1:cdsmRNAPa10g1034.1
