Pa11g0038.1

West Indian T2T · mRNA

Pa11g0038.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,815
bp
Pa11:1,200,663–1,249,864
genomic location
Record overview

Feature identity

Identifier
Pa11g0038.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
1,815 bp
Genomic location
Pa11:1,200,663–1,249,864
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: Pa11g0038

eggNOG
Preferred name: TFB1-1 | Seed ortholog: 337451.A0A3S3P278 | COG: S | eggNOG OG: BSD@131567|A-1*, BSD@2759|C-2, PH_TFIIH@2759|A-1
Gene Ontology
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity; GO:0001111 RNA polymerase II promoter clearance; GO:0001113 transcription open complex formation at RNA polymerase II promoter; GO:0003674 molecular_function; GO:0005634 nucleus; GO:0006281 DNA repair; GO:0006289 nucleotide-excision repair; GO:0006360 transcription by RNA polymerase I; GO:0006366 transcription by RNA polymerase II; GO:0006367 transcription initiation at RNA polymerase II promoter; GO:0009411 response to UV; GO:0009755 hormone-mediated signaling pathway; GO:0045893 positive regulation of DNA-templated transcription; GO:1990830 cellular response to leukemia inhibitory factor
KEGG
KO: K03141 | Pathway: 03022, 03420 | BRITE: 00001, 03021, 03400
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.

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