West Indian T2T · gene

Pa12g0622

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

9,758
bp
Pa12:14,435,583–14,445,340
genomic location
Record overview

Feature identity

Identifier
Pa12g0622
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
9,758 bp
Genomic location
Pa12:14,435,583–14,445,340
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: NFYB3 | Seed ortholog: 337451.A0A3S3RB14 | COG: COG2036 | eggNOG OG: CBFD_NFYB_HMF@131567|BS-10, CBFD_NFYB_HMF@2759|ID-16
Gene Ontology
GO:0000785 chromatin; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0008622 epsilon DNA polymerase complex; GO:0008623 CHRAC; GO:0009408 response to heat; GO:0009414 response to water deprivation; GO:0043596 nuclear replication fork; GO:0140672 ATAC complex
KEGG
EC: ec:2.7.7.7 | KO: K02326 | Pathway: 03030, 03082, 03410, 03420 | BRITE: 00001, 01000, 03032, 03036, 03400
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.