West Indian T2T · gene

Pa09g0376

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

11,526
bp
Pa09:4,591,850–4,603,375
genomic location
Record overview

Feature identity

Identifier
Pa09g0376
Feature type
gene
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
11,526 bp
Genomic location
Pa09:4,591,850–4,603,375
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC104606142, LOC107791417 | Seed ortholog: 429701.A0A2G9GHH0, 51240.A0A2I4DWH7 | COG: S | eggNOG OG: HSBP1@131567|A-1, HSBP1@3398|Cx-11, HSBP1@3398|Cy-11
Gene Ontology
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0003674 molecular_function; GO:0003714 transcription corepressor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005794 Golgi apparatus; GO:0005813 centrosome; GO:0005829 cytosol; GO:0006936 muscle contraction; GO:0007417 central nervous system development; GO:0009408 response to heat; GO:0010468 regulation of gene expression; GO:0010520 regulation of reciprocal meiotic recombination; GO:0014029 neural crest formation; GO:0016607 nuclear speck; GO:0019896 axonal transport of mitochondrion; GO:0031072 heat shock protein binding; GO:0035987 endodermal cell differentiation; GO:0042802 identical protein binding; GO:0048316 seed development; GO:0065003 protein-containing complex assembly; GO:0070370 cellular heat acclimation; GO:0071203 WASH complex; GO:0140297 DNA-binding transcription factor binding
KEGG
KO: K19765 | Pathway: 04212 | BRITE: 00001
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.