Feature identity
- Identifier
- Pa08g1642
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,922 bp
- Genomic location
- Pa08:43,683,127–43,685,048
- Strand
- +
West Indian T2T · gene
Pa08g1642
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,922
- bp
- Pa08:43,683,127–43,685,048
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: BHLH30 | Seed ortholog: 337451.A0A443P6Y8 | COG: S | eggNOG OG: HLH@131567|OW-12, HLH@3398|BHN-21, HLH@35493|Abn-19
- Gene Ontology
- GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0042802 identical protein binding; GO:0042803 protein homodimerization activity; GO:0046982 protein heterodimerization activity; GO:1990837 sequence-specific double-stranded DNA binding
- KEGG
- KO: K09092, K22495 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa08g1642.1
part_ofgenePa08g1642
