Feature identity
- Identifier
- Pa07g3456
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 6,923 bp
- Genomic location
- Pa07:72,340,330–72,347,252
- Strand
- −
West Indian T2T · gene
Pa07g3456
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 6,923
- bp
- Pa07:72,340,330–72,347,252
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: GTF2H2 | Seed ortholog: 337451.A0A3S4P5H3 | COG: S | eggNOG OG: C1_4@2759|A-1, Ssl1@2759|A-1
- Gene Ontology
- GO:0005515 protein binding; GO:0005634 nucleus; GO:0005675 transcription factor TFIIH holo complex; GO:0006289 nucleotide-excision repair; GO:0006357 regulation of transcription by RNA polymerase II; GO:0008270 zinc ion binding; GO:0016251 RNA polymerase II general transcription initiation factor activity; GO:0061630 ubiquitin protein ligase activity
- KEGG
- EC: ec:2.3.1.225, ec:3.1.3.16 | KO: K03142 | Pathway: 03022, 03420 | BRITE: 00001, 03021, 03400
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa07g3456.1
part_ofgenePa07g3456
mRNAPa07g3456.2
part_ofgenePa07g3456
