Feature identity
- Identifier
- Pa05g3209
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 20,436 bp
- Genomic location
- Pa05:72,574,799–72,595,234
- Strand
- −
West Indian T2T · gene
Pa05g3209
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 20,436
- bp
- Pa05:72,574,799–72,595,234
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: LOC110797633 | Seed ortholog: 337451.A0A3S3ME99 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AHp-26, Myb_DNA-binding@2759|BJn-31
- Gene Ontology
- GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000995 RNA polymerase III general transcription initiation factor activity; GO:0001006 RNA polymerase III type 3 promoter sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003681 bent DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0006383 transcription by RNA polymerase III; GO:0008150 biological_process; GO:0016251 RNA polymerase II general transcription initiation factor activity; GO:0019185 snRNA-activating protein complex; GO:0031016 pancreas development; GO:0035622 intrahepatic bile duct development; GO:0042795 snRNA transcription by RNA polymerase II; GO:0042796 snRNA transcription by RNA polymerase III; GO:0043565 sequence-specific DNA binding; GO:0065004 protein-DNA complex assembly
- KEGG
- KO: K09422 | Pathway: 03040 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa05g3209.1
part_ofgenePa05g3209
mRNAPa05g3209.2
part_ofgenePa05g3209
mRNAPa05g3209.3
part_ofgenePa05g3209
