Feature identity
- Identifier
- Pa05g1333
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 3,145 bp
- Genomic location
- Pa05:43,304,542–43,307,686
- Strand
- −
West Indian T2T · gene
Pa05g1333
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,145
- bp
- Pa05:43,304,542–43,307,686
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: MYB80 | Seed ortholog: 337451.A0A3S4NYR6 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3193|LYX-44, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@35493|JKf-42
- Gene Ontology
- GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0010090 trichome morphogenesis; GO:0043565 sequence-specific DNA binding; GO:0048658 anther wall tapetum development
- KEGG
- EC: ec:1.17.99.9 | KO: K09422 | Pathway: 00190, 00860, 01100, 01110, 01240 | Module: M00154 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa05g1333.1
part_ofgenePa05g1333
