Feature identity
- Identifier
- PaHa01g17740.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,580 bp
- Genomic location
- 1:29,348,637–29,356,174
- Strand
- +
Hass · mRNA
PaHa01g17740.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,580
- bp
- 1:29,348,637–29,356,174
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g17740
- eggNOG
- Preferred name: SDP1 | Seed ortholog: 337451.A0A443NMX0 | COG: S | eggNOG OG: DUF3336@131567|B-2, DUF3336@3398|Cu-10, Patatin@131567|Ea-11, Patatin@3398|JhE-35
- Gene Ontology
- GO:0004806 triacylglycerol lipase activity; GO:0005634 nucleus; GO:0005777 peroxisome; GO:0005811 lipid droplet; GO:0006641 triglyceride metabolic process; GO:0012511 monolayer-surrounded lipid storage body; GO:0016020 membrane; GO:0016042 lipid catabolic process; GO:0019433 triglyceride catabolic process
- KEGG
- EC: ec:2.3.1.51, ec:3.1.1.13, ec:3.1.1.3, ec:3.1.1.4 | KO: K14674 | Pathway: 00100, 00561, 00564, 00565, 00590, 00591, 00592, 01100, 01110 | Module: M00089, M00098 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g17740.1-protein
derives_frommRNAPaHa01g17740.1
mRNAPaHa01g17740.1
part_ofgenePaHa01g17740
CDS
part_ofPaHa01g17740.1-CDS-1-1787993825:29348637..29350055mRNAPaHa01g17740.1
CDS
part_ofPaHa01g17740.1-CDS-1-1787993825:29354844..29354987mRNAPaHa01g17740.1
CDS
part_ofPaHa01g17740.1-CDS-1-1787993825:29355158..29356174mRNAPaHa01g17740.1
exon
part_ofPaHa01g17740.1-exon-1-1787993825:29348637..29350055mRNAPaHa01g17740.1
exon
part_ofPaHa01g17740.1-exon-1-1787993825:29354844..29354987mRNAPaHa01g17740.1
exon
part_ofPaHa01g17740.1-exon-1-1787993825:29355158..29356174mRNAPaHa01g17740.1
