Feature identity
- Identifier
- PaHa05g26260.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,200 bp
- Genomic location
- 5:70,267,241–70,279,574
- Strand
- −
Hass · mRNA
PaHa05g26260.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,200
- bp
- 5:70,267,241–70,279,574
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g26260
- eggNOG
- Preferred name: LOC116205931 | Seed ortholog: 56857.A0A200Q9A0 | COG: COG0451 | eggNOG OG: NmrA@131567|Ab-7, NmrA@3398|Bjr-25, NmrA@58023|ZD-17
- Gene Ontology
- GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006979 response to oxidative stress; GO:0009507 chloroplast; GO:0009807 lignan biosynthetic process; GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor; GO:0090377 seed trichome initiation
- KEGG
- EC: ec:1.3.1.45 | KO: K23050 | Pathway: 00943, 01100, 01110 | Module: M00942 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g26260.1-protein
derives_frommRNAPaHa05g26260.1
mRNAPaHa05g26260.1
part_ofgenePaHa05g26260
CDS
part_ofPaHa05g26260.1-CDS-5-1787993825:70267241..70267558mRNAPaHa05g26260.1
CDS
part_ofPaHa05g26260.1-CDS-5-1787993825:70274076..70274197mRNAPaHa05g26260.1
CDS
part_ofPaHa05g26260.1-CDS-5-1787993825:70274371..70274574mRNAPaHa05g26260.1
CDS
part_ofPaHa05g26260.1-CDS-5-1787993825:70276725..70276962mRNAPaHa05g26260.1
CDS
part_ofPaHa05g26260.1-CDS-5-1787993825:70279182..70279316mRNAPaHa05g26260.1
CDS
part_ofPaHa05g26260.1-CDS-5-1787993825:70279392..70279574mRNAPaHa05g26260.1
exon
part_ofPaHa05g26260.1-exon-5-1787993825:70267241..70267558mRNAPaHa05g26260.1
exon
part_ofPaHa05g26260.1-exon-5-1787993825:70274076..70274197mRNAPaHa05g26260.1
exon
part_ofPaHa05g26260.1-exon-5-1787993825:70274371..70274574mRNAPaHa05g26260.1
exon
part_ofPaHa05g26260.1-exon-5-1787993825:70276725..70276962mRNAPaHa05g26260.1
exon
part_ofPaHa05g26260.1-exon-5-1787993825:70279182..70279316mRNAPaHa05g26260.1
exon
part_ofPaHa05g26260.1-exon-5-1787993825:70279392..70279574mRNAPaHa05g26260.1
