Feature identity
- Identifier
- PaHa05g15560.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 435 bp
- Genomic location
- 5:52,045,791–52,064,503
- Strand
- −
Hass · mRNA
PaHa05g15560.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 435
- bp
- 5:52,045,791–52,064,503
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa05g15560
- eggNOG
- Preferred name: LOC103700911 | Seed ortholog: 337451.A0A443NXL8 | eggNOG OG: MAPEG@131567|AG-7
- Gene Ontology
- GO:0004364 glutathione transferase activity; GO:0004464 leukotriene-C4 synthase activity; GO:0004602 glutathione peroxidase activity; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0005741 mitochondrial outer membrane; GO:0005789 endoplasmic reticulum membrane; GO:0006629 lipid metabolic process; GO:0006692 prostanoid metabolic process; GO:0016020 membrane; GO:0019370 leukotriene biosynthetic process; GO:0042802 identical protein binding
- KEGG
- EC: ec:2.5.1.18 | KO: K00799 | Pathway: 00480, 01100 | Module: M00089 | BRITE: 00001, 01000, 02000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa05g15560.1-protein
derives_frommRNAPaHa05g15560.1
mRNAPaHa05g15560.1
part_ofgenePaHa05g15560
CDS
part_ofPaHa05g15560.1-CDS-5-1787993825:52045791..52045866mRNAPaHa05g15560.1
CDS
part_ofPaHa05g15560.1-CDS-5-1787993825:52063951..52064123mRNAPaHa05g15560.1
CDS
part_ofPaHa05g15560.1-CDS-5-1787993825:52064217..52064292mRNAPaHa05g15560.1
CDS
part_ofPaHa05g15560.1-CDS-5-1787993825:52064394..52064503mRNAPaHa05g15560.1
exon
part_ofPaHa05g15560.1-exon-5-1787993825:52045791..52045866mRNAPaHa05g15560.1
exon
part_ofPaHa05g15560.1-exon-5-1787993825:52063951..52064123mRNAPaHa05g15560.1
exon
part_ofPaHa05g15560.1-exon-5-1787993825:52064217..52064292mRNAPaHa05g15560.1
exon
part_ofPaHa05g15560.1-exon-5-1787993825:52064394..52064503mRNAPaHa05g15560.1
