PaHa01g16130.1

Hass · mRNA

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,653: bp
1:26,232,002–26,239,688: genomic location

Record overview

Feature identity

Identifier: PaHa01g16130.1
Feature type: mRNA
Genome collection: Hass
Organism: Persea americana-Hass
Sequence length: 1,653 bp
Genomic location: 1:26,232,002–26,239,688
Strand: −

Open original Tripal record

Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: PaHa01g16130

eggNOG: Preferred name: CVP2 | Seed ortholog: 337451.A0A3S5WGI6 | COG: S | eggNOG OG: Exo_endo_phos@131567|Jb-15, Exo_endo_phos@2759|HUL-31, Exo_endo_phos@3193|PYr-39, Exo_endo_phos@3398|XTG-46, Exo_endo_phos@58023|SlE-42
Gene Ontology: GO:0001701 in utero embryonic development; GO:0001755 neural crest cell migration; GO:0001919 regulation of receptor recycling; GO:0003094 glomerular filtration; GO:0003341 cilium movement; GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; GO:0004445 inositol-polyphosphate 5-phosphatase activity; GO:0005096 GTPase activator activity; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0006629 lipid metabolic process; GO:0006661 phosphatidylinositol biosynthetic process; GO:0006897 endocytosis; GO:0006911 phagocytosis, engulfment; GO:0007032 endosome organization; GO:0007283 spermatogenesis; GO:0007420 brain development; GO:0008150 biological_process; GO:0009507 chloroplast; GO:0019954 asexual reproduction; GO:0030100 regulation of endocytosis; GO:0030317 flagellated sperm motility; GO:0031152 aggregation involved in sorocarp development; GO:0031267 small GTPase binding; GO:0032402 melanosome transport; GO:0033298 contractile vacuole organization; GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity; GO:0034593 phosphatidylinositol bisphosphate phosphatase activity; GO:0034596 phosphatidylinositol phosphate 4-phosphatase activity; GO:0035776 pronephric proximal tubule development; GO:0039023 pronephric duct morphogenesis; GO:0043009 chordate embryonic development; GO:0043473 pigmentation; GO:0043647 inositol phosphate metabolic process; GO:0043813 phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity; GO:0044782 cilium organization; GO:0046580 negative regulation of Ras protein signal transduction; GO:0046856 phosphatidylinositol dephosphorylation; GO:0048259 regulation of receptor-mediated endocytosis; GO:0048701 embryonic cranial skeleton morphogenesis; GO:0048884 neuromast development; GO:0050829 defense response to Gram-negative bacterium; GO:0052658 inositol-1,4,5-trisphosphate 5-phosphatase activity; GO:0052659 inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity; GO:0052745 inositol phosphate phosphatase activity; GO:0060271 cilium assembly; GO:0061024 membrane organization; GO:0070121 Kupffer's vesicle development; GO:0070177 contractile vacuole discharge; GO:0070613 regulation of protein processing; GO:0071871 response to epinephrine; GO:0097205 renal filtration
KEGG: EC: ec:3.1.3.36 | KO: K01099, K20279 | Pathway: 00562, 01100, 04070 | BRITE: 00001, 01000, 04131

Biological context