Feature identity
- Identifier
- PaHa01g15840.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,131 bp
- Genomic location
- 1:25,790,905–25,795,801
- Strand
- +
Hass · mRNA
PaHa01g15840.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,131
- bp
- 1:25,790,905–25,795,801
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g15840
- eggNOG
- Preferred name: LOC104593481 | Seed ortholog: 337451.A0A3S3Q6L5 | COG: S | eggNOG OG: AP2@131567|Eo-12, AP2@3193|Apw-24, AP2@33090|Xs-18, AP2@58023|Bfl-26
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006109 regulation of carbohydrate metabolic process; GO:0006110 regulation of glycolytic process; GO:0006629 lipid metabolic process; GO:0008610 lipid biosynthetic process; GO:0009744 response to sucrose; GO:0019432 triglyceride biosynthetic process; GO:0019900 kinase binding; GO:1901959 positive regulation of cutin biosynthetic process
- KEGG
- KO: K09285 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g15840.1-protein
derives_frommRNAPaHa01g15840.1
mRNAPaHa01g15840.1
part_ofgenePaHa01g15840
CDS
part_ofPaHa01g15840.1-CDS-1-1787993825:25790905..25791083mRNAPaHa01g15840.1
CDS
part_ofPaHa01g15840.1-CDS-1-1787993825:25791207..25791289mRNAPaHa01g15840.1
CDS
part_ofPaHa01g15840.1-CDS-1-1787993825:25791470..25791478mRNAPaHa01g15840.1
CDS
part_ofPaHa01g15840.1-CDS-1-1787993825:25791705..25791793mRNAPaHa01g15840.1
CDS
part_ofPaHa01g15840.1-CDS-1-1787993825:25791891..25792015mRNAPaHa01g15840.1
CDS
part_ofPaHa01g15840.1-CDS-1-1787993825:25792092..25792168mRNAPaHa01g15840.1
CDS
part_ofPaHa01g15840.1-CDS-1-1787993825:25795233..25795801mRNAPaHa01g15840.1
exon
part_ofPaHa01g15840.1-exon-1-1787993825:25790905..25791083mRNAPaHa01g15840.1
exon
part_ofPaHa01g15840.1-exon-1-1787993825:25791207..25791289mRNAPaHa01g15840.1
exon
part_ofPaHa01g15840.1-exon-1-1787993825:25791470..25791478mRNAPaHa01g15840.1
exon
part_ofPaHa01g15840.1-exon-1-1787993825:25791705..25791793mRNAPaHa01g15840.1
exon
part_ofPaHa01g15840.1-exon-1-1787993825:25791891..25792015mRNAPaHa01g15840.1
exon
part_ofPaHa01g15840.1-exon-1-1787993825:25792092..25792168mRNAPaHa01g15840.1
exon
part_ofPaHa01g15840.1-exon-1-1787993825:25795233..25795801mRNAPaHa01g15840.1
