Feature identity
- Identifier
- PaHa04g04180.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 777 bp
- Genomic location
- 4:10,064,666–10,074,445
- Strand
- +
Hass · mRNA
PaHa04g04180.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 777
- bp
- 4:10,064,666–10,074,445
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa04g04180
- eggNOG
- Preferred name: BnaC07g48690D | Seed ortholog: 337451.A0A3S3PIH5 | COG: S | eggNOG OG: Methyltransf_15@131221|Ke-17, Methyltransf_15@131567|A-1
- Gene Ontology
- GO:0000387 spliceosomal snRNP assembly; GO:0001510 RNA methylation; GO:0003674 molecular_function; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008033 tRNA processing; GO:0008173 RNA methyltransferase activity; GO:0009452 7-methylguanosine RNA capping; GO:0009507 chloroplast; GO:0017126 nucleologenesis; GO:0022613 ribonucleoprotein complex biogenesis; GO:0032210 regulation of telomere maintenance via telomerase; GO:0036261 7-methylguanosine cap hypermethylation; GO:0042308 negative regulation of protein import into nucleus; GO:0051321 meiotic cell cycle; GO:0061178 regulation of insulin secretion involved in cellular response to glucose stimulus; GO:0071164 RNA cap trimethylguanosine synthase activity; GO:0071333 cellular response to glucose stimulus; GO:0071398 cellular response to fatty acid; GO:0099139 cheating during chimeric sorocarp development
- KEGG
- EC: ec:2.3.1.48 | KO: K14292 | Pathway: 03022 | BRITE: 00001, 03041
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa04g04180.1-protein
derives_frommRNAPaHa04g04180.1
mRNAPaHa04g04180.1
part_ofgenePaHa04g04180
CDS
part_ofPaHa04g04180.1-CDS-4-1787993825:10064666..10064759mRNAPaHa04g04180.1
CDS
part_ofPaHa04g04180.1-CDS-4-1787993825:10066279..10066522mRNAPaHa04g04180.1
CDS
part_ofPaHa04g04180.1-CDS-4-1787993825:10068284..10068419mRNAPaHa04g04180.1
CDS
part_ofPaHa04g04180.1-CDS-4-1787993825:10072116..10072207mRNAPaHa04g04180.1
CDS
part_ofPaHa04g04180.1-CDS-4-1787993825:10073759..10073882mRNAPaHa04g04180.1
CDS
part_ofPaHa04g04180.1-CDS-4-1787993825:10074359..10074445mRNAPaHa04g04180.1
exon
part_ofPaHa04g04180.1-exon-4-1787993825:10064666..10064759mRNAPaHa04g04180.1
exon
part_ofPaHa04g04180.1-exon-4-1787993825:10066279..10066522mRNAPaHa04g04180.1
exon
part_ofPaHa04g04180.1-exon-4-1787993825:10068284..10068419mRNAPaHa04g04180.1
exon
part_ofPaHa04g04180.1-exon-4-1787993825:10072116..10072207mRNAPaHa04g04180.1
exon
part_ofPaHa04g04180.1-exon-4-1787993825:10073759..10073882mRNAPaHa04g04180.1
exon
part_ofPaHa04g04180.1-exon-4-1787993825:10074359..10074445mRNAPaHa04g04180.1
