Feature identity
- Identifier
- PaHa_c151g00420
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,803 bp
- Genomic location
- unplaced_contig_151:45,132–47,313
- Strand
- −
Hass · gene
PaHa_c151g00420
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,803
- bp
- unplaced_contig_151:45,132–47,313
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: FGENESH: | Seed ortholog: 857342.A0A2T3BBI0 | COG: S | eggNOG OG: Metallophos@131567|Qk-14, Metallophos@2759|Env-26!, Metallophos@4751|XxZ-40
- Gene Ontology
- GO:0001778 plasma membrane repair; GO:0004767 sphingomyelin phosphodiesterase activity; GO:0005515 protein binding; GO:0005576 extracellular region; GO:0005764 lysosome; GO:0005765 lysosomal membrane; GO:0005768 endosome; GO:0005886 plasma membrane; GO:0006629 lipid metabolic process; GO:0006672 ceramide metabolic process; GO:0006684 sphingomyelin metabolic process; GO:0006685 sphingomyelin catabolic process; GO:0007165 signal transduction; GO:0007399 nervous system development; GO:0008203 cholesterol metabolic process; GO:0008270 zinc ion binding; GO:0009410 response to xenobiotic stimulus; GO:0009615 response to virus; GO:0010212 response to ionizing radiation; GO:0022904 respiratory electron transport chain; GO:0023021 termination of signal transduction; GO:0033344 cholesterol efflux; GO:0034340 response to type I interferon; GO:0034480 phosphatidylcholine phospholipase C activity; GO:0034612 response to tumor necrosis factor; GO:0034644 cellular response to UV; GO:0035002 liquid clearance, open tracheal system; GO:0036019 endolysosome; GO:0036021 endolysosome lumen; GO:0042060 wound healing; GO:0042220 response to cocaine; GO:0042599 lamellar body; GO:0043065 positive regulation of apoptotic process; GO:0043202 lysosomal lumen; GO:0043409 negative regulation of MAPK cascade; GO:0045121 membrane raft; GO:0045807 positive regulation of endocytosis; GO:0046479 glycosphingolipid catabolic process; GO:0046513 ceramide biosynthetic process; GO:0046598 positive regulation of viral entry into host cell; GO:0046718 symbiont entry into host cell; GO:0061750 acid sphingomyelin phosphodiesterase activity; GO:0070062 extracellular exosome; GO:0070269 pyroptotic inflammatory response; GO:0070555 response to interleukin-1; GO:0071277 cellular response to calcium ion; GO:1905691 lipid droplet disassembly
- KEGG
- EC: ec:3.1.4.12 | KO: K12350 | Pathway: 00600, 01100 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
genePaHa_c151g00420
