Feature identity
- Identifier
- PaHa01g10470.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 930 bp
- Genomic location
- 1:15,340,523–15,346,639
- Strand
- −
Hass · mRNA
PaHa01g10470.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 930
- bp
- 1:15,340,523–15,346,639
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g10470
- eggNOG
- Preferred name: ptges2 | Seed ortholog: 337451.A0A443NL74 | COG: COG0625 | eggNOG OG: GST_N_3@131567|Y-5
- Gene Ontology
- GO:0000139 Golgi membrane; GO:0001516 prostaglandin biosynthetic process; GO:0003677 DNA binding; GO:0005515 protein binding; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005829 cytosol; GO:0006629 lipid metabolic process; GO:0016829 lyase activity; GO:0019371 cyclooxygenase pathway; GO:0020037 heme binding; GO:0035578 azurophil granule lumen; GO:0036134 12-hydroxyheptadecatrienoic acid synthase activity; GO:0042802 identical protein binding; GO:0043295 glutathione binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0046457 prostanoid biosynthetic process; GO:0046903 secretion; GO:0050220 prostaglandin-E synthase activity
- KEGG
- EC: ec:5.3.99.3 | KO: K05309 | Pathway: 00590, 01100 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g10470.1-protein
derives_frommRNAPaHa01g10470.1
mRNAPaHa01g10470.1
part_ofgenePaHa01g10470
CDS
part_ofPaHa01g10470.1-CDS-1-1787993825:15340523..15340683mRNAPaHa01g10470.1
CDS
part_ofPaHa01g10470.1-CDS-1-1787993825:15340781..15340948mRNAPaHa01g10470.1
CDS
part_ofPaHa01g10470.1-CDS-1-1787993825:15345696..15345790mRNAPaHa01g10470.1
CDS
part_ofPaHa01g10470.1-CDS-1-1787993825:15345878..15345956mRNAPaHa01g10470.1
CDS
part_ofPaHa01g10470.1-CDS-1-1787993825:15346101..15346235mRNAPaHa01g10470.1
CDS
part_ofPaHa01g10470.1-CDS-1-1787993825:15346348..15346639mRNAPaHa01g10470.1
exon
part_ofPaHa01g10470.1-exon-1-1787993825:15340523..15340683mRNAPaHa01g10470.1
exon
part_ofPaHa01g10470.1-exon-1-1787993825:15340781..15340948mRNAPaHa01g10470.1
exon
part_ofPaHa01g10470.1-exon-1-1787993825:15345696..15345790mRNAPaHa01g10470.1
exon
part_ofPaHa01g10470.1-exon-1-1787993825:15345878..15345956mRNAPaHa01g10470.1
exon
part_ofPaHa01g10470.1-exon-1-1787993825:15346101..15346235mRNAPaHa01g10470.1
exon
part_ofPaHa01g10470.1-exon-1-1787993825:15346348..15346639mRNAPaHa01g10470.1
