Functional Annotation Search

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Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046: West Indian T2T annotations
3+: indexed evidence types

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2,385 genes for “transcription factor”

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Select	Gene	Matched annotation	Evidence	Actions
Select Pa11g2252	Pa11g2252`Pa11g2252.1`	…584 \| GO:1902806 \| GO:2000037 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| embryo sac development \| megasporogenesis \| response to gravity \| response to auxin \| response to abscisic… Show annotation evidence eggNOG Preferred name: LOC102721183 \| Seed ortholog: 337451.A0A443NCC7 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AhC-29 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009553 embryo sac development; GO:0009554 megasporogenesis; GO:0009629 response to gravity; GO:0009733 response to auxin; GO:0009737 response to abscisic acid; GO:0009926 auxin polar transport; GO... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa11g2254	Pa11g2254`Pa11g2254.1`	…826 \| GO:0080022 \| GO:1901000 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to gibberellin \| response to sucrose \| leaf morphogenesis \| lateral root formation \| root system development \| sequence-specific DNA binding … Show annotation evidence eggNOG Preferred name: HOX21 \| Seed ortholog: 337451.A0A3S3PL41 \| COG: S \| eggNOG OG: HALZ@131567\|BQ-11, Homeodomain@131567\|XU-17, Homeodomain@2759\|ACU-20!, Homeodomain@3193\|GUH-31, Homeodomain@3398\|LcL-35, Homeodomain@35493\|BwQ-25 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009739 response to gibberellin; GO:0009744 response to sucrose; GO:0009965 leaf morphogenesis; GO:0010311 lateral root formation; GO:0022622 root system development; GO:0043565 sequence-specific DNA binding; GO:0048364 root development; GO:0048527 lateral... KEGG KO: K09338 \| Pathway: 04113, 04148, 04927, 04934, 05202 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa11g2264	Pa11g2264`Pa11g2264.1`	…tion of transcription by RNA polymerase II \| rDNA heterochromatin formation \| DNA-binding transcription factor activity, RNA polymerase II-specific \| RNA polymerase I core promoter sequence-specific DNA binding \| ATPase activator activity \| blastocyst hatching \| embryonic placenta development \| mole… Show annotation evidence eggNOG Preferred name: RLT3 \| Seed ortholog: 337451.A0A3S3NRS7 \| COG: S \| eggNOG OG: DDT@131567\|B-2!, DDT@33090\|y-7, Homeodomain@131567\|ED-11, Homeodomain@2759\|Fb-12, WHIM1@131567\|C-2, WHIM1@33090\|DN-10, WSD@131567\|A-1*, WSD@33090\|Q-5 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000183 rDNA heterochromatin formation; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding; GO:0001671 ATPase activator activity; GO:0001835 blastocyst hatching; GO:0001892 embryonic placenta development; GO:0003674 molecular_function; GO... KEGG EC: ec:2.3.1.48 \| KO: K09307, K09368, K11655, K11658, K11728, K15224, K15607, K18490, K22768, K24893, K26167 \| Pathway: 03082 \| BRITE: 00001, 01000, 03000, 03021, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa11g2267	Pa11g2267`Pa11g2267.1`	…301 \| GO:0080086 \| GO:0140964 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| circadian rhythm \| response to cytokinin \| response to abscisic acid \| response to gibberellin \| regulatio… Show annotation evidence eggNOG Preferred name: LOC110806156 \| Seed ortholog: 337451.A0A443PQP6 \| COG: S \| eggNOG OG: TCP@131221\|AC-7, TCP@131567\|A-1*, TCP@2759\|G-3, TCP@3193\|ET-12, TCP@3398\|Zw-20 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0009735 response to cytokinin; GO:0009737 response to abscisic acid; GO:0009739 response to gibberellin; GO:0010029 regulation of seed germination; GO:0010229 inflorescence...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa11g2272	Pa11g2272`Pa11g2272.1`	…GO:0003700 \| GO:0005634 \| GO:0009733 \| GO:0045770 \| GO:0048103 \| GO:0048829 \| DNA-binding transcription factor activity \| nucleus \| response to auxin \| positive regulation of asymmetric cell division \| somatic stem cell division \| root cap development Show annotation evidence eggNOG Preferred name: FEZ \| Seed ortholog: 337451.A0A3S4PP91 \| COG: S \| eggNOG OG: NAM@131567\|A-1*, NAM@3193\|hd-15, NAM@3398\|CDh-26, NAM@35493\|AE-6, NAM@58023\|BJP-23 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009733 response to auxin; GO:0045770 positive regulation of asymmetric cell division; GO:0048103 somatic stem cell division; GO:0048829 root cap development	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa11g2277	Pa11g2277`Pa11g2277.1`	…893 \| GO:1904278 \| GO:2000033 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to cold \| response to water deprivation \| regulation of abscisic acid-activated signaling pathway… Show annotation evidence eggNOG Preferred name: MYB306 \| Seed ortholog: 337451.A0A443PQR6 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@1437183\|ZMr-55, Myb_DNA-binding@33090\|FSl-38, Myb_DNA-binding@3398\|USz-51, Myb_DNA-binding@35493\|KPp-43 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009787 regulation of abscisic acid-activated signaling pathway; GO:0009789 positive regulation of abscisic acid-activated... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa11g2279	Pa11g2279`Pa11g2279.1`	… binding \| DNA-templated transcriptional start site selection \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to water deprivation \| response to blue light \| response to gibberellin \| glucosinolate metabolic process \| protein homodimerization activity… Show annotation evidence eggNOG Preferred name: ZHD11 \| Seed ortholog: 337451.A0A443PQQ7 \| COG: S \| eggNOG OG: ZF-HD_dimer@131567\|A-1*, ZF-HD_dimer@35493\|Aq-9 GO GO:0000976 transcription cis-regulatory region binding; GO:0001173 DNA-templated transcriptional start site selection; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0009637 response to blue light; GO:0009739 response to gibberellin; GO:0019760 glucosinolate metabolic process; GO:0042803...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa11g2302	Pa11g2302`Pa11g2302.1`	…GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0009555 \| GO:0010152 \| GO:0080092 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| pollen development \| pollen maturation \| regulation of pollen tube growth Show annotation evidence eggNOG Preferred name: LOC123094739 \| Seed ortholog: 337451.A0A443PT27 \| COG: S \| eggNOG OG: SRF-TF@131567\|A-1*, SRF-TF@1437183\|CEp-29, SRF-TF@2759\|C-2!, SRF-TF@3398\|AOO-23, SRF-TF@58023\|ai-19 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009555 pollen development; GO:0010152 pollen maturation; GO:0080092 regulation of pollen tube growth KEGG KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 \| Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 \| BRITE: 00001, 03000, 03021, 04131	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0305	Pa12g0305`Pa12g0305.1`	…O:0043565 \| GO:0045814 \| GO:0048589 \| GO:0090333 \| GO:0099402 \| DNA binding \| DNA-binding transcription factor activity \| nucleus \| response to water deprivation \| response to abscisic acid \| abscisic acid-activated signaling pathway \| chromatin DNA binding \| histone H3K4 demethylase activity \| hist… Show annotation evidence eggNOG Preferred name: LOC100819576, LOC104596082 \| Seed ortholog: 4432.A0A1U8A1C0, 56857.A0A200QRM3 \| COG: S \| eggNOG OG: ARID@131567\|A-1, ARID@2759\|CS-9, JmjC@131567\|Ae-7, JmjC@2759\|Xi-17, JmjN@131567\|A-1, JmjN@2759\|Bi-10, PHD@131567\|A-1, PHD@2759\|Vu-13, PLU-1@131567\|A-1, zf-C5HC2@131567\|A-1, zf-C5HC2@2759\|C-2! GO GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0009737 response to abscisic acid; GO:0009738 abscisic acid-activated signaling pathway; GO:0031490 chromatin DNA binding; GO:0032453 histone H3K4 demethylase activity; GO:0034647 histone H3K4me/H3K4me2/H3K4me3 demethylase activity; GO:0043565 sequence-specific DNA binding;... KEGG EC: ec:1.14.11.67 \| KO: K11446 \| Pathway: 03022, 03082, 03083, 04550 \| BRITE: 00001, 01000, 01009, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0329	Pa12g0329`Pa12g0329.1`	Pa12g0329 \| Pa12g0329.1 \| Pa12g0329.2 \| LOC104612494 \| 337451.A0A443Q2I3 \| CID@131567\|A-1* \| CID@2759\|AD-6 \| CID@3193\|qa-21 \| S \| K14400 \| 03015 \| 00001 \| 03019 \| 03021 \| CID_81_189 \| GO:0000785 \| GO:0000993 \| GO:0003674 \| GO:0003723 \| GO:0003729 \| GO... Show annotation evidence eggNOG Preferred name: LOC104612494 \| Seed ortholog: 337451.A0A443Q2I3 \| COG: S \| eggNOG OG: CID@131567\|A-1*, CID@2759\|AD-6, CID@3193\|qa-21 GO GO:0000785 chromatin; GO:0000993 RNA polymerase II complex binding; GO:0003674 molecular_function; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005739 mitochondrion; GO:0005829 cytosol; GO:0005848 mRNA cleavage stimulating factor complex; GO:0005849 mRNA cleavage factor complex; GO:0006369 termination of... KEGG KO: K14400 \| Pathway: 03015 \| BRITE: 00001, 03019, 03021	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0330	Pa12g0330`Pa12g0330.1`	…O:0003700 \| GO:0005515 \| GO:0005634 \| GO:0006355 \| GO:0009408 \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to heat Show annotation evidence eggNOG Preferred name: HSFA3 \| Seed ortholog: 337451.A0A3S3R997 \| COG: S \| eggNOG OG: HSF_DNA-bind@131567\|Dp-10, HSF_DNA-bind@3193\|AWe-23, HSF_DNA-bind@33090\|fZ-18, HSF_DNA-bind@3398\|AhZ-24, HSF_DNA-bind@35493\|uY-20 GO GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat KEGG KO: K09419 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0353	Pa12g0353`Pa12g0353.1`	…gulatory region sequence-specific DNA binding \| double-stranded DNA binding \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| pollen development \| anatomical structure morphogenesis \| auxin-activated signaling pathway \| pollen wall assembly \| adventi… Show annotation evidence eggNOG Preferred name: ARF17 \| Seed ortholog: 337451.A0A443Q2J5 \| COG: S \| eggNOG OG: Auxin_resp@131221\|AX-8, Auxin_resp@131567\|A-1, Auxin_resp@2759\|O-4, Auxin_resp@3398\|CO-11, B3@131221\|AHw-20, B3@131567\|A-1, B3@3193\|BOq-25, B3@33090\|Id-12 GO GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003690 double-stranded DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0009653 anatomical structure morphogenesis; GO:0009734 auxin-activated signaling pathway; GO:0010208 pollen wall assembly; GO:0048830 adventitious root... KEGG KO: K14486 \| Pathway: 04075 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0405	Pa12g0405`Pa12g0405.1`	Pa12g0405 \| Pa12g0405.1 \| PP1 \| 4432.A0A1U8AAN4 \| Metallophos@131567\|AWl-19 \| Metallophos@1437183\|nCR-47 \| Metallophos@2759\|RnV-36! \| Metallophos@3398\|cTJ-42 \| STPPase_N@131567\|A-1* \| STPPase_N@1437183\|eZ-29 \| STPPase_N@2759\|Aw-12 \| STPPase_N@33090\|Oh-22 \|... Show annotation evidence eggNOG Preferred name: PP1 \| Seed ortholog: 4432.A0A1U8AAN4 \| COG: S \| eggNOG OG: Metallophos@131567\|AWl-19, Metallophos@1437183\|nCR-47, Metallophos@2759\|RnV-36!, Metallophos@3398\|cTJ-42, STPPase_N@131567\|A-1*, STPPase_N@1437183\|eZ-29, STPPase_N@2759\|Aw-12, STPPase_N@33090\|Oh-22 GO GO:0000022 mitotic spindle elongation; GO:0000070 mitotic sister chromatid segregation; GO:0000076 DNA replication checkpoint signaling; GO:0000077 DNA damage checkpoint signaling; GO:0000131 incipient cellular bud site; GO:0000164 protein phosphatase type 1 complex; GO:0000165 MAPK cascade; GO:0000278 mitotic cell cycle; GO:0000282 cellular bud site selection; GO:0000723 telomere maintenance; GO:0000776... KEGG EC: ec:3.1.3.16 \| KO: K06269 \| Pathway: 03015 \| BRITE: 00001, 01000, 01009, 03019, 03021, 03041	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0459	Pa12g0459`Pa12g0459.1`	…O:0009737 \| GO:0009793 \| GO:0031930 \| GO:0043565 \| GO:0045893 \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytosol \| regulation of DNA-templated transcription \| plastid organization \| response to auxin \| response to abscisic acid \| embryo development ending… Show annotation evidence eggNOG Preferred name: VP1 \| Seed ortholog: 337451.A0A443N759 \| COG: S \| eggNOG OG: B3@131567\|A-1*, B3@33090\|AIM-20, B3@3398\|CTd-30, B3@58023\|Bmr-27 GO GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0009657 plastid organization; GO:0009733 response to auxin; GO:0009737 response to abscisic acid; GO:0009793 embryo development ending in seed dormancy; GO:0031930 mitochondria-nucleus signaling pathway; GO:0043565... KEGG KO: K09287 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0494	Pa12g0494`Pa12g0494.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: LOC104227944, LOC104592198 \| Seed ortholog: 337451.A0A3S3N7X7, 42345.A0A2H3ZDS1 \| COG: COG5635, S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@3398\|Dli-32, NB-ARC@35493\|Ary-24, NB-ARC@58023\|BfR-27, Transpos_assoc@131567\|A-1*, Transpos_assoc@2759\|Aa-11, Transpos_assoc@3398\|Bh-13 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K13457 \| Pathway: 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0499	Pa12g0499`Pa12g0499.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: LOC104592198 \| Seed ortholog: 337451.A0A3S3N7X7 \| COG: COG5635 \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@3398\|Dli-32, NB-ARC@35493\|Ary-24, NB-ARC@58023\|BfR-27 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K13457 \| Pathway: 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0512	Pa12g0512`Pa12g0512.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A3S3PTI0 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0514	Pa12g0514`Pa12g0514.1`	…mycetes \| innate immune response-activating signaling pathway \| DNA binding \| DNA-binding transcription factor activity \| mRNA binding \| protein binding \| cellular_component \| nucleus \| cytoplasm \| mitochondrion \| endoplasmic reticulum membrane \| cytosol \| plasma membrane \| defense response \| respon… Show annotation evidence eggNOG Preferred name: RGA3 \| Seed ortholog: 337451.A0A443N271 \| COG: S \| eggNOG OG: NB-ARC@131567\|AC-6, NB-ARC@1437183\|IZq-39!, NB-ARC@3193\|Cnn-30, NB-ARC@35493\|Aho-23, Rx_N@131567\|O-4, Rx_N@1437183\|Sv-12 GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO... KEGG EC: ec:3.1.3.16 \| KO: K19613 \| Pathway: 04016, 04075, 04626 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0595	Pa12g0595`Pa12g0595.1`	… transcription repressor activity, RNA polymerase II-specific \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| nucleoplasm \| cytoplasm \| regulation of DNA-templated transcription \| regulation of transcription by RNA polymerase II \| specification of segmental id… Show annotation evidence eggNOG Preferred name: WIP3 \| Seed ortholog: 337451.A0A443Q2C0 \| COG: S \| eggNOG OG: zf-C2H2@131567\|qO-18, zf-C2H2@1437183\|IJz-30, zf-C2H2@2759\|AFG-19 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000976 transcription cis-regulatory region binding; GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0006355 regulation of DNA... KEGG KO: K09191, K09228, K09236, K22535, K24853, K25869, K25870, K25871 \| Pathway: 04391, 05168 \| BRITE: 00001, 03000, 03021	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0621	Pa12g0621`Pa12g0621.1`	…binding \| cis-regulatory region sequence-specific DNA binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to cold \| response to water deprivation \| response to salt stress \| response to abscisic acid \| a… Show annotation evidence eggNOG Preferred name: ABI5 \| Seed ortholog: 337451.A0A3S4Q0E9 \| COG: S \| eggNOG OG: bZIP_1@131567\|BO-8!, bZIP_1@3193\|AIn-24, bZIP_1@33090\|aa-18, bZIP_1@3398\|Atv-27, bZIP_1@35493\|AAI-23 GO GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009651 response to salt stress; GO:0009737... KEGG KO: K14432 \| Pathway: 04075 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0622	Pa12g0622`Pa12g0622.1`	… GO:0008623 \| GO:0009408 \| GO:0009414 \| GO:0043596 \| GO:0140672 \| chromatin \| DNA-binding transcription factor activity \| protein binding \| cellular_component \| nucleus \| cytosol \| regulation of DNA-templated transcription \| epsilon DNA polymerase complex \| CHRAC \| response to heat \| response to wat… Show annotation evidence eggNOG Preferred name: NFYB3 \| Seed ortholog: 337451.A0A3S3RB14 \| COG: COG2036 \| eggNOG OG: CBFD_NFYB_HMF@131567\|BS-10, CBFD_NFYB_HMF@2759\|ID-16 GO GO:0000785 chromatin; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0008622 epsilon DNA polymerase complex; GO:0008623 CHRAC; GO:0009408 response to heat; GO:0009414 response to water deprivation; GO:0043596 nuclear replication fork; GO:0140672 ATAC... KEGG EC: ec:2.7.7.7 \| KO: K02326 \| Pathway: 03030, 03082, 03410, 03420 \| BRITE: 00001, 01000, 03032, 03036, 03400	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0630	Pa12g0630`Pa12g0630.1`	…634 \| GO:0006355 \| GO:0140728 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| GC-box binding Show annotation evidence eggNOG Preferred name: BHLH92 \| Seed ortholog: 337451.A0A3S3NKE4 \| COG: S \| eggNOG OG: HLH@131567\|Zg-14!, HLH@3193\|BFY-21, HLH@33090\|AAF-17, HLH@3398\|CEE-24, HLH@35493\|AbE-19 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0140728 GC-box binding	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0632	Pa12g0632`Pa12g0632.1`	…516 \| GO:0005634 \| GO:0019760 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| calmodulin binding \| nucleus \| glucosinolate metabolic process Show annotation evidence eggNOG Preferred name: WRKY21 \| Seed ortholog: 337451.A0A3S3QTG6 \| COG: S \| eggNOG OG: Plant_zn_clust@131567\|A-1, Plant_zn_clust@3193\|I-4, Plant_zn_clust@3398\|By-10, WRKY@131567\|A-1, WRKY@2759\|CB-10, WRKY@3193\|AGq-23, WRKY@33090\|Ic-14, WRKY@3398\|AOc-24 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0019760 glucosinolate metabolic process KEGG KO: K13425 \| Pathway: 04016, 04626 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0711	Pa12g0711`Pa12g0711.1`	…O:0051302 \| GO:0051446 \| GO:0051726 \| GO:0070176 \| GO:0140612 \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| positive regulation of cell population proliferation \| response to auxin \| trichome morphogenesis \| programmed cell death \| positive regul… Show annotation evidence eggNOG Preferred name: E2FB \| Seed ortholog: 337451.A0A443Q243 \| COG: S \| eggNOG OG: E2F_CC-MB@131567\|A-1*, E2F_CC-MB@2759\|B-2, E2F_CC-MB@3398\|IS-15, E2F_TDP@131567\|Af-9, E2F_TDP@3193\|bj-27 GO GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0008284 positive regulation of cell population proliferation; GO:0009733 response to auxin; GO:0010090 trichome morphogenesis; GO:0012501 programmed cell death; GO:0045893 positive regulation of DNA-templated transcription; GO:0051302 regulation of cell division; GO... KEGG KO: K06620 \| Pathway: 01522, 03083, 04110, 04137, 04218, 04350, 04934, 05160, 05161, 05163, 05165, 05166, 05167, 05169, 05200, 05206, 05207, 05212, 05214, 05215, 05218, 05219, 05220, 05222, 05223, 05224, 05225, 05226 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0867	Pa12g0867`Pa12g0867.1`	…ing \| RNA polymerase II cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription factor activity, RNA polymerase II-specific \| DNA-binding transcription repressor activity, RNA polymerase II-specific \| DNA-binding transcription activator activity, RNA polymerase II-specific \| … Show annotation evidence eggNOG Preferred name: LOC110800298 \| Seed ortholog: 337451.A0A443NEV4 \| COG: S \| eggNOG OG: bZIP_1@131567\|iz-20, bZIP_1@33090\|BLk-28, bZIP_1@3398\|Gjb-39 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000785 chromatin; GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001227... KEGG KO: K05870, K09052, K09053, K09060, K25784 \| Pathway: 04022, 04024, 04148, 04151, 04152, 04211, 04261, 04380, 04612, 04668, 04710, 04713, 04714, 04725, 04728, 04911, 04915, 04916, 04918, 04922, 04924, 04925, 04926, 04927, 04928, 04931, 04934, 04935, 04962, 05016, 05020, 05030, 05031, 05034, 05152, 05161, 05163, 05165, 05166, 05167, 05202, 05203, 05207, 05215 \| BRITE: 00001, 03000, 03029	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0868	Pa12g0868`Pa12g0868.1`	…0008150 \| condensed chromosome \| condensed nuclear chromosome \| DNA binding \| DNA-binding transcription factor activity \| nucleus \| biological_process Show annotation evidence eggNOG Preferred name: HMGB13 \| Seed ortholog: 337451.A0A3S3N1A8 \| COG: S \| eggNOG OG: HMG_box@131567\|Aj-7, HMG_box@2759\|Of-14 GO GO:0000793 condensed chromosome; GO:0000794 condensed nuclear chromosome; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0008150 biological_process KEGG EC: ec:2.1.1.354 \| KO: K09273 \| Pathway: 00310, 01100 \| BRITE: 00001, 03000, 03021	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0892	Pa12g0892`Pa12g0892.1`	…ding_30_80 \| GO:0003700 \| GO:0005515 \| GO:0005575 \| GO:0006355 \| GO:2000762 \| DNA-binding transcription factor activity \| protein binding \| cellular_component \| regulation of DNA-templated transcription \| regulation of phenylpropanoid metabolic process Show annotation evidence eggNOG Preferred name: LOC123128098 \| Seed ortholog: 42345.A0A2H3YKB2 \| COG: S \| eggNOG OG: Myb_CC_LHEQLE@131567\|A-1*, Myb_CC_LHEQLE@3193\|Z-8, Myb_CC_LHEQLE@33090\|S-7, Myb_CC_LHEQLE@3398\|i-9, Myb_DNA-binding@131567\|dl-20, Myb_DNA-binding@2759\|pK-22, Myb_DNA-binding@3193\|BXZ-32, Myb_DNA-binding@33090\|Apr-30 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0006355 regulation of DNA-templated transcription; GO:2000762 regulation of phenylpropanoid metabolic process KEGG EC: ec:6.3.4.5 \| KO: K01940 \| Pathway: 00220, 00250, 01100, 01110, 01230 \| Module: M00029, M00844, M00845, M00978 \| BRITE: 00001, 01000, 04147	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0893	Pa12g0893`Pa12g0893.1`	…00 \| GO:1990641 \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to wounding \| cinnamic acid biosynthetic process \| response to iron ion starvation Show annotation evidence eggNOG Preferred name: LOC104589418 \| Seed ortholog: 337451.A0A3S3NKR8 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@33090\|FSl-38, Myb_DNA-binding@3398\|UUF-51, Myb_DNA-binding@35493\|KPq-43 GO GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009611 response to wounding; GO:0009800 cinnamic acid biosynthetic process; GO:1990641 response to iron ion starvation KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0905	Pa12g0905`Pa12g0905.1`	…atrioventricular bundle cell differentiation \| cardiac atrium morphogenesis \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| regulation of transcription by RNA polymerase II \| spermatogenesis \| regulation of mitotic cell cycle \| de… Show annotation evidence eggNOG Preferred name: BLH1 \| Seed ortholog: 337451.A0A3S3PSZ1 \| COG: S \| eggNOG OG: Homeobox_KN@131567\|A-1, Homeobox_KN@1437183\|dZ-19, Homeobox_KN@2759\|C-2!, Homeobox_KN@3398\|Ja-14, Homeobox_KN@58023\|Dh-11, POX@131567\|A-1, POX@1437183\|Em-15, POX@3193\|W-7, POX@3398\|s-9 GO GO:0000082 G1/S transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000281 mitotic cytokinesis; GO:0001525 angiogenesis; GO:0001654 eye development; GO:0001656 metanephros development; GO:0001700 embryonic development via the syncytial blastoderm; GO:0001742 oenocyte differentiation; GO:0001745 compound eye morphogenesis; GO:0001752 compound eye photoreceptor... KEGG EC: ec:2.1.1.354 \| KO: K09355, K09359, K15610, K15611, K15613, K16670, K16671, K16672, K19383, K19553, K19554, K22748, K24889, K24890, K24891 \| Pathway: 00310, 01100, 04113, 04148, 04350, 04391, 04550, 05202 \| BRITE: 00001, 01000, 03000, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa12g0910	Pa12g0910`Pa12g0910.1`	…GO:0010078 \| GO:0010089 \| GO:0010479 \| GO:0042803 \| GO:0045893 \| GO:0048364 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| maintenance of root meristem identity \| xylem development \| stele development \| protein homodimerization a… Show annotation evidence eggNOG Preferred name: LHW \| Seed ortholog: 337451.A0A3S3NR84 \| COG: S \| eggNOG OG: bHLH-MYC_N@131567\|A-1*, bHLH-MYC_N@2759\|B-2, bHLH-MYC_N@3193\|m-7, bHLH-MYC_N@3398\|AT-9 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010078 maintenance of root meristem identity; GO:0010089 xylem development; GO:0010479 stele development; GO:0042803 protein homodimerization activity; GO:0045893 positive regulation of DNA-templated transcription; GO:0048364 root development	eggNOGGO eggNOG-inferred	Record JBrowse Workspace

Functional Annotation Search

2,385 genes for “transcription factor”

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