Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046
West Indian T2T annotations
3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

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2,385 genes for “transcription factor”

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GO enrichmentExport FASTA
SelectGeneMatched annotationEvidenceActions
Pa02g3657Pa02g3657.1

…tory region binding | response to hypoxia | DNA binding | chromatin binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to ethylene | jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signali…

Show annotation evidence
eggNOG
Preferred name: EIN3 | Seed ortholog: 337451.A0A443N727 | COG: S | eggNOG OG: EIN3@131567|A-1*, EIN3@35493|a-5!
GO
GO:0000976 transcription cis-regulatory region binding; GO:0001666 response to hypoxia; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009723 response to ethylene; GO:0009871 jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated...
KEGG
KO: K14514 | Pathway: 04016, 04075 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa02g3666Pa02g3666.1

Pa02g3666 | Pa02g3666.1 | PanPGP22 | 337451.A0A443N750 | ABC_membrane@131567|aH-23 | ABC_membrane@2759|CyF-36 | ABC_membrane@3398|rpF-52 | ABC_membrane@35493|WZq-46 | ABC_tran|0DFRDX@131567 | ABC_tran|0DFRDX@3398 | S | ec:7.6.2.2 | K05658 | 02010 | 00001 |...

Show annotation evidence
eggNOG
Preferred name: PanPGP22 | Seed ortholog: 337451.A0A443N750 | COG: S | eggNOG OG: ABC_membrane@131567|aH-23, ABC_membrane@2759|CyF-36, ABC_membrane@3398|rpF-52, ABC_membrane@35493|WZq-46, ABC_tran|0DFRDX@131567, ABC_tran|0DFRDX@3398
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000139 Golgi membrane; GO:0001654 eye development; GO:0001666 response to hypoxia; GO:0001894 tissue homeostasis; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005768 endosome; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0005919 pleated septate junction; GO:0005925 focal...
KEGG
EC: ec:7.6.2.2 | KO: K05658 | Pathway: 02010 | BRITE: 00001, 01000, 02000, 04090, 04147
eggNOGGOKEGG
eggNOG-inferred
Pa02g3669Pa02g3669.1

Pa02g3669 | Pa02g3669.1 | PanPGP22 | 337451.A0A443NYS4 | ABC_membrane@131567|aH-23 | ABC_membrane@2759|CyF-36 | ABC_membrane@3398|rpF-52 | ABC_membrane@35493|WZq-46 | ABC_tran|0DFRDX@131567 | ABC_tran|0DFRDX@3398 | S | ec:7.6.2.2 | K05658 | 02010 | 00001 |...

Show annotation evidence
eggNOG
Preferred name: PanPGP22 | Seed ortholog: 337451.A0A443NYS4 | COG: S | eggNOG OG: ABC_membrane@131567|aH-23, ABC_membrane@2759|CyF-36, ABC_membrane@3398|rpF-52, ABC_membrane@35493|WZq-46, ABC_tran|0DFRDX@131567, ABC_tran|0DFRDX@3398
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000139 Golgi membrane; GO:0001654 eye development; GO:0001666 response to hypoxia; GO:0001894 tissue homeostasis; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005768 endosome; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0005919 pleated septate junction; GO:0005925 focal...
KEGG
EC: ec:7.6.2.2 | KO: K05658 | Pathway: 02010 | BRITE: 00001, 01000, 02000, 04090, 04147
eggNOGGOKEGG
eggNOG-inferred
Pa02g3670Pa02g3670.1

Pa02g3670 | Pa02g3670.1 | PGP16 | 29760.F6GTQ0 | ABC_membrane@131567|aH-23 | ABC_membrane@2759|CyF-36 | ABC_membrane@3398|rpG-52 | ABC_membrane@35493|WZq-46 | ABC_tran|I26EF0@131567 | ABC_tran|I26EF0@33090 | S | ec:7.6.2.2 | K05658 | 02010 | 00001 | 01000 |...

Show annotation evidence
eggNOG
Preferred name: PGP16 | Seed ortholog: 29760.F6GTQ0 | COG: S | eggNOG OG: ABC_membrane@131567|aH-23, ABC_membrane@2759|CyF-36, ABC_membrane@3398|rpG-52, ABC_membrane@35493|WZq-46, ABC_tran|I26EF0@131567, ABC_tran|I26EF0@33090
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000139 Golgi membrane; GO:0001654 eye development; GO:0001666 response to hypoxia; GO:0001894 tissue homeostasis; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005768 endosome; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0005919 pleated septate junction; GO:0005925 focal...
KEGG
EC: ec:7.6.2.2 | KO: K05658 | Pathway: 02010 | BRITE: 00001, 01000, 02000, 04090, 04147
eggNOGGOKEGG
eggNOG-inferred
Pa02g3671Pa02g3671.1

Pa02g3671 | Pa02g3671.1 | PGP16 | 542762.A0A4S4ERQ2 | ABC_membrane@131567|aH-23 | ABC_membrane@2759|CyF-36 | ABC_membrane@3398|rpG-52 | ABC_membrane@35493|WZq-46 | ABC_tran|0U9VYJ@131567 | S | ec:7.6.2.2 | K05658 | 02010 | 00001 | 01000 | 02000 | 04090 |...

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eggNOG
Preferred name: PGP16 | Seed ortholog: 542762.A0A4S4ERQ2 | COG: S | eggNOG OG: ABC_membrane@131567|aH-23, ABC_membrane@2759|CyF-36, ABC_membrane@3398|rpG-52, ABC_membrane@35493|WZq-46, ABC_tran|0U9VYJ@131567
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000139 Golgi membrane; GO:0001654 eye development; GO:0001666 response to hypoxia; GO:0001894 tissue homeostasis; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005768 endosome; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0005919 pleated septate junction; GO:0005925 focal...
KEGG
EC: ec:7.6.2.2 | KO: K05658 | Pathway: 02010 | BRITE: 00001, 01000, 02000, 04090, 04147
eggNOGGOKEGG
eggNOG-inferred
Pa02g3674Pa02g3674.1

…GO:0009751 | GO:0009753 | GO:0010167 | GO:0010182 | GO:0032204 | GO:0042542 | DNA-binding transcription factor activity | protein binding | calmodulin binding | nucleus | cytoplasm | regulation of DNA-templated transcription | circadian rhythm | response to cold | embryo sac development | pollen dev…

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eggNOG
Preferred name: BT2 | Seed ortholog: 337451.A0A3S3M6Y0 | COG: S | eggNOG OG: BTB@131567|AAN-18, BTB@2759|Cex-25, BTB@3193|cbw-51, zf-TAZ@131567|A-1*, zf-TAZ@2759|B-2, zf-TAZ@3193|E-3
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0009409 response to cold; GO:0009553 embryo sac development; GO:0009555 pollen development; GO:0009611 response to wounding; GO:0009651 response to salt stress; GO:0009733...
KEGG
KO: K10471, K10472, K10477, K10478, K10480, K10481, K10523, K11267, K20129 | Pathway: 04341 | BRITE: 00001, 03036, 04121, 04131
eggNOGGOKEGG
eggNOG-inferred
Pa02g3701Pa02g3701.1

…r_function | DNA binding | minor groove of adenine-thymine-rich DNA binding | DNA-binding transcription factor activity | protein binding | cellular_component | nucleus | nucleoplasm | chromosome | nucleolus | cytoplasm | mitochondrion | plasma membrane | biological_process | xylem and phloem patter…

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eggNOG
Preferred name: ESC | Seed ortholog: 337451.A0A3S3MT57 | COG: S | eggNOG OG: PCC@131567|A-1, PCC@33090|WK-15!
GO
GO:0000976 transcription cis-regulatory region binding; GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003680 minor groove of adenine-thymine-rich DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO...
eggNOGGO
eggNOG-inferred
Pa02g3716Pa02g3716.1

…O:0009737 | GO:0009793 | GO:0031930 | GO:0043565 | GO:0045893 | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytosol | regulation of DNA-templated transcription | plastid organization | response to auxin | response to abscisic acid | embryo development ending…

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eggNOG
Preferred name: VP1 | Seed ortholog: 337451.A0A443N759 | COG: S | eggNOG OG: B3@131567|A-1*, B3@33090|AIM-20, B3@3398|CTd-30, B3@58023|Bmr-27
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0009657 plastid organization; GO:0009733 response to auxin; GO:0009737 response to abscisic acid; GO:0009793 embryo development ending in seed dormancy; GO:0031930 mitochondria-nucleus signaling pathway; GO:0043565...
KEGG
KO: K09287 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa02g3729Pa02g3729.1

…628 | GO:0016036 | GO:0043565 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | double fertilization forming a zygote and endosperm | regulation of gene expression | positive regulation …

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eggNOG
Preferred name: PHL2 | Seed ortholog: 337451.A0A443N787 | COG: S | eggNOG OG: Myb_CC_LHEQLE@131567|A-1*, Myb_CC_LHEQLE@3193|Z-8, Myb_CC_LHEQLE@33090|S-7, Myb_CC_LHEQLE@3398|Bx-13, Myb_DNA-binding@131567|dl-20, Myb_DNA-binding@2759|pK-22, Myb_DNA-binding@3193|Bsq-33, Myb_DNA-binding@33090|Apr-30, Myb_DNA-binding@3398|CtT-35
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009567 double fertilization forming a zygote and endosperm; GO:0010468 regulation of gene expression; GO:0010628 positive regulation of gene expression; GO:0016036 cellular response to phosphate...
KEGG
EC: ec:6.3.4.5 | KO: K01940 | Pathway: 00220, 00250, 01100, 01110, 01230 | Module: M00029, M00844, M00845, M00978 | BRITE: 00001, 01000, 04147
eggNOGGOKEGG
eggNOG-inferred
Pa02g3734Pa02g3734.1

…8023|Wp-18 | K09286 | 00001 | 03000 | AP2_223_272 | GO:0003700 | GO:0005634 | DNA-binding transcription factor activity | nucleus

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eggNOG
Preferred name: LOC116215516 | Seed ortholog: 337451.A0A3S3LZN2 | eggNOG OG: AP2@131567|DU-11, AP2@3193|KQ-15, AP2@33090|Hu-14, AP2@58023|Wp-18
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus
KEGG
KO: K09286 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa02g3740Pa02g3740.1

…020 | GO:0045893 | GO:2000377 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | cytoplasm | endoplasmic reticulum membrane | plasma membrane | response to high light intensity | drought recovery | regulation of flavonoid biosynthetic process | leaf…

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eggNOG
Preferred name: NAC078 | Seed ortholog: 337451.A0A443PVJ0 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|oz-16, NAM@35493|AE-6, NAM@58023|Abm-20
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005789 endoplasmic reticulum membrane; GO:0005886 plasma membrane; GO:0009644 response to high light intensity; GO:0009819 drought recovery; GO:0009962 regulation of flavonoid biosynthetic process; GO:0010150 leaf senescence; GO:0016020 membrane; GO:0045893...
eggNOGGO
eggNOG-inferred
Pa02g3759Pa02g3759.1

…RNA polymerase II transcription regulator complex | M/G1 phase-specific MADS box-forkhead transcription factor complex | sympathetic neuron axon guidance | cell-cell adhesion | NMDA selective glutamate receptor signaling pathway | AMPA selective glutamate receptor signaling pathway | adenylate cycla…

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eggNOG
Preferred name: MADS23 | Seed ortholog: 337451.A0A443NNC6 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@1437183|BB-11, SRF-TF@2759|C-2!, SRF-TF@3193|Ae-10
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0001568 blood vessel development; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001701 in utero embryonic development; GO:0001707 mesoderm formation; GO...
KEGG
KO: K12412 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
Pa02g3766Pa02g3766.1

Pa02g3766 | Pa02g3766.1 | Pa02g3766.2 | Pa02g3766.3 | R1A-6_16 | 337451.A0A443N7B7 | zf-CCHC@131567|Em-12 | zf-CCHC@2759|np-19 | zf-GRF@131567|a-5 | S | ec:3.1.11.2 | ec:3.1.4.1 | ec:4.2.99.18 | ec:5.6.2.1 | ec:5.6.2.3 | ec:5.6.2.5 | ec:7.2.2.8 | K01142 |...

Show annotation evidence
eggNOG
Preferred name: R1A-6_16 | Seed ortholog: 337451.A0A443N7B7 | COG: S | eggNOG OG: zf-CCHC@131567|Em-12, zf-CCHC@2759|np-19, zf-GRF@131567|a-5
GO
GO:0000012 single strand break repair; GO:0000278 mitotic cell cycle; GO:0000405 bubble DNA binding; GO:0000712 resolution of meiotic recombination intermediates; GO:0000724 double-strand break repair via homologous recombination; GO:0000725 recombinational repair; GO:0001650 fibrillar center; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003684 damaged DNA binding; GO:0003690 double-stranded DNA...
KEGG
EC: ec:3.1.11.2, ec:3.1.4.1, ec:4.2.99.18, ec:5.6.2.1, ec:5.6.2.3, ec:5.6.2.5, ec:7.2.2.8 | KO: K01142, K03165, K09276, K10569, K10706, K10772, K11292, K13187, K14440, K15173, K15363, K17491, K17686, K18417, K25177 | Pathway: 03410, 03440, 03460, 04918 | BRITE: 00001, 01000, 01009, 03000, 03009, 03019, 03021, 03032, 03036, 03041, 03400
eggNOGGOKEGG
eggNOG-inferred
Pa02g3810Pa02g3810.1

…92 | GO:1900055 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | response to salt stress | response to abscisic acid | xylem development | leaf senescence | negative regulation of gene expression | negative regulati…

Show annotation evidence
eggNOG
Preferred name: LOC103708093 | Seed ortholog: 214687.M0RIW9 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|RR-12, NAM@3398|Auu-22, NAM@35493|AE-6, NAM@4640|FfZ-34
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009651 response to salt stress; GO:0009737 response to abscisic acid; GO:0010089 xylem development; GO:0010150 leaf senescence; GO:0010629 negative regulation of gene expression; GO:0045892 negative regulation of DNA-templated...
eggNOGGO
eggNOG-inferred
Pa02g3820Pa02g3820.1

…739 | GO:0009873 | GO:0010030 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | response to gibberellin | ethylene-activated signaling pathway | positive regulation of seed germination

Show annotation evidence
eggNOG
Preferred name: LEP | Seed ortholog: 337451.A0A3S3LZR3 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@1437183|BUc-26, AP2@33090|KL-15, AP2@3398|kG-20, AP2@58023|RX-17
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009739 response to gibberellin; GO:0009873 ethylene-activated signaling pathway; GO:0010030 positive regulation of seed germination
KEGG
KO: K09286 | Pathway: 04626 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa02g3837Pa02g3837.1

…O:0005654 | GO:0006383 | GO:0006384 | GO:0008150 | GO:0016604 | GO:0042791 | GO:0042797 | transcription factor TFIIIC complex | molecular_function | cellular_component | nucleus | nucleoplasm | transcription by RNA polymerase III | transcription initiation at RNA polymerase III promoter | biological…

Show annotation evidence
eggNOG
Preferred name: LOC103719190 | Seed ortholog: 337451.A0A443N7J6 | COG: S | eggNOG OG: TFIIIC_sub6@2759|A-1
GO
GO:0000127 transcription factor TFIIIC complex; GO:0003674 molecular_function; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0006383 transcription by RNA polymerase III; GO:0006384 transcription initiation at RNA polymerase III promoter; GO:0008150 biological_process; GO:0016604 nuclear body; GO:0042791 5S class rRNA transcription by RNA polymerase III; GO:0042797 tRNA transcription...
KEGG
KO: K15203 | BRITE: 00001, 03021
eggNOGGOKEGG
eggNOG-inferred
Pa02g3851Pa02g3851.1

…92 | GO:1900055 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | response to salt stress | response to abscisic acid | xylem development | leaf senescence | negative regulation of gene expression | negative regulati…

Show annotation evidence
eggNOG
Preferred name: ONAC010 | Seed ortholog: 337451.A0A443N7G1 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|RR-12, NAM@3398|Auu-22, NAM@35493|AE-6
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009651 response to salt stress; GO:0009737 response to abscisic acid; GO:0010089 xylem development; GO:0010150 leaf senescence; GO:0010629 negative regulation of gene expression; GO:0045892 negative regulation of DNA-templated...
eggNOGGO
eggNOG-inferred
Pa02g3881Pa02g3881.1

Pa02g3881 | Pa02g3881.1 | Pa02g3881.2 | Pa02g3881.3 | LOC106780117 | 337451.A0A443N7I1 | GYF@131567|A-1* | GYF@2759|C-2 | GYF@3398|dX-21 | GYF@35493|Uz-19 | S | K18730 | 00001 | 03019 | GYF_484_528 | GO:0000900 | GO:0003674 | GO:0003723 | GO:0005515 | GO...

Show annotation evidence
eggNOG
Preferred name: LOC106780117 | Seed ortholog: 337451.A0A443N7I1 | COG: S | eggNOG OG: GYF@131567|A-1*, GYF@2759|C-2, GYF@3398|dX-21, GYF@35493|Uz-19
GO
GO:0000900 mRNA regulatory element binding translation repressor activity; GO:0003674 molecular_function; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005768 endosome; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0005794 Golgi apparatus; GO:0005829 cytosol; GO:0006357...
KEGG
KO: K18730 | BRITE: 00001, 03019
eggNOGGOKEGG
eggNOG-inferred
Pa02g3889Pa02g3889.1

…binding | cis-regulatory region sequence-specific DNA binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | regulation of cell size | anatomical structure morphogenesis | sequence-specific DNA binding | negative re…

Show annotation evidence
eggNOG
Preferred name: LOC110785696 | Seed ortholog: 337451.A0A443N7I3 | COG: S | eggNOG OG: TCP@131221|AC-7, TCP@131567|A-1*, TCP@2759|G-3, TCP@3193|DK-11, TCP@3398|Fm-13
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008361 regulation of cell size; GO:0009653 anatomical structure morphogenesis; GO:0043565 sequence-specific DNA...
eggNOGGO
eggNOG-inferred
Pa02g3901Pa02g3901.1

…ing | RNA polymerase II cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity, RNA polymerase II-specific | cis-regulatory region sequence-specific DNA binding | transcription coactivator binding | DNA-binding transcription repressor activity, RNA polymerase…

Show annotation evidence
eggNOG
Preferred name: CMTA4 | Seed ortholog: 337451.A0A443N7N1 | COG: S | eggNOG OG: Ank_2@131567|Mm-10, Ank_2@2759|BXW-16, Ank_2@3193|Xgb-28, CG-1@2759|A-1, CG-1@3193|Aj-9, CG-1@35493|P-5, IQ@131567|aD-16, IQ@35493|Alg-22, TIG@131567|Og-15, TIG@33090|BzP-31
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0001223 transcription coactivator...
KEGG
KO: K21596 | Pathway: 01523, 03266, 03440, 04010, 04014, 04024, 04062, 04064, 04066, 04071, 04075, 04144, 04151, 04210, 04211, 04218, 04380, 04613, 04620, 04621, 04622, 04623, 04624, 04625, 04657, 04658, 04659, 04660, 04662, 04668, 04722, 04820, 04917, 04920, 04926, 04931, 04932, 04933, 04936, 05010, 05022, 05030, 05132, 05133, 05134, 05135, 05140, 05142, 05145, 05146, 05152, 05160, 05161, 05162, 05163, 05164,...
eggNOGGOKEGG
eggNOG-inferred
Pa02g3906Pa02g3906.1

…O:0048481 | GO:0048833 | GO:0080001 | cell fate specification | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | flower development | specification of floral organ identity | seed coat development | plant ovule development | specification of floral organ number |…

Show annotation evidence
eggNOG
Preferred name: SEP3 | Seed ortholog: 337451.A0A443N7K4 | COG: S | eggNOG OG: K-box@131567|A-1*, K-box@2759|Ah-7, K-box@3398|bY-16, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3193|jV-20, SRF-TF@3398|DMa-32, SRF-TF@35493|bP-19
GO
GO:0001708 cell fate specification; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009908 flower development; GO:0010093 specification of floral organ identity; GO:0010214 seed coat development; GO:0048481 plant ovule development; GO:0048833 specification of floral organ number; GO:0080001 mucilage extrusion from seed coat
KEGG
KO: K09264 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa02g3911Pa02g3911.1

…634 | GO:0006817 | GO:0046686 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | phosphate ion transport | response to cadmium ion

Show annotation evidence
eggNOG
Preferred name: WRKY75 | Seed ortholog: 337451.A0A443N7P2 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@1437183|BJN-28, WRKY@2759|VE-17, WRKY@3398|tS-21
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006817 phosphate ion transport; GO:0046686 response to cadmium ion
eggNOGGO
eggNOG-inferred
Pa02g3913Pa02g3913.1

…34 | GO:0010043 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | response to zinc ion

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eggNOG
Preferred name: BZIP19 | Seed ortholog: 337451.A0A3S3NT28 | COG: S | eggNOG OG: bZIP_2@131567|Fg-13, bZIP_2@2759|LL-15, bZIP_2@3193|ADB-23
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0010043 response to zinc ion
KEGG
KO: K25785 | Pathway: 04013, 04624 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa02g4342Pa02g4342.1

…ription activator activity, RNA polymerase II-specific | molecular_function | DNA-binding transcription factor activity | protein binding | cellular_component | nucleus | circadian rhythm | plasmodesma | red, far-red light phototransduction | response to red or far red light | red or far-red light s…

Show annotation evidence
eggNOG
Preferred name: LOC107910899 | Seed ortholog: 337451.A0A443N7S9 | COG: S | eggNOG OG: FAR1@131567|A-1*, FAR1@2759|C-2!, MULE@131567|BE-8, MULE@2759|Dt-10
GO
GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003674 molecular_function; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0007623 circadian rhythm; GO:0009506 plasmodesma; GO:0009585 red, far-red light phototransduction; GO...
KEGG
EC: ec:2.1.1.117, ec:5.3.1.6 | KO: K01807, K13397, K17604 | Pathway: 00030, 00710, 00950, 01100, 01110, 01200, 01230 | Module: M00004, M00007, M00165, M00580, M00946 | BRITE: 00001, 01000, 01009
eggNOGGOKEGG
eggNOG-inferred
Pa02g4388Pa02g4388.1

Pa02g4388 | Pa02g4388.1 | LOC104589361 | 337451.A0A443NN26 | PBD@131567|A-1* | PBD@2759|wA-21 | PBD@3398|Efa-57 | S | ec:2.7.11.1 | K04409 | K04410 | K05733 | 04010 | 04011 | 04012 | 04014 | 04024 | 04062 | 04360 | 04392 | 04510 | 04625 | 04650 | 04660 |...

Show annotation evidence
eggNOG
Preferred name: LOC104589361 | Seed ortholog: 337451.A0A443NN26 | COG: S | eggNOG OG: PBD@131567|A-1*, PBD@2759|wA-21, PBD@3398|Efa-57
GO
GO:0000011 vacuole inheritance; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000131 incipient cellular bud site; GO:0000165 MAPK cascade; GO:0000282 cellular bud site selection; GO:0000749 response to pheromone triggering conjugation with cellular fusion; GO:0001402 signal transduction involved in filamentous growth; GO:0001403 invasive growth in response to glucose limitation; GO...
KEGG
EC: ec:2.7.11.1 | KO: K04409, K04410, K05733 | Pathway: 04010, 04011, 04012, 04014, 04024, 04062, 04360, 04392, 04510, 04625, 04650, 04660, 04666, 04810, 05132, 05170, 05205, 05211 | BRITE: 00001, 01000, 01001, 03036, 04131
eggNOGGOKEGG
eggNOG-inferred
Pa02g4434Pa02g4434.1

…515 | GO:0005634 | GO:0006355 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: BHLH62 | Seed ortholog: 337451.A0A443N7Z7 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|Hdr-32, HLH@33090|AbH-19, HLH@3398|Mgj-36
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
Pa02g4452Pa02g4452.1

…GO:0045944 | GO:0046084 | GO:0055070 | GO:0120213 | GO:1900373 | GO:1900445 | DNA-binding transcription factor activity | protein binding | nucleus | regulation of purine nucleobase metabolic process | chromatin remodeling | filamentous growth | filamentous growth of a population of unicellular orga…

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eggNOG
Preferred name: LOC109019799 | Seed ortholog: 337451.A0A443N800 | COG: S | eggNOG OG: Homeodomain@131567|ED-11, Homeodomain@2759|NR-15, Homeodomain@3193|ApY-22
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006141 regulation of purine nucleobase metabolic process; GO:0006338 chromatin remodeling; GO:0030447 filamentous growth; GO:0044182 filamentous growth of a population of unicellular organisms; GO:0045937 positive regulation of phosphate metabolic process; GO:0045944 positive regulation of transcription by RNA...
KEGG
KO: K02646, K09301, K09307, K09320, K09326, K09327, K09364, K09451, K09533, K22234 | Pathway: 04111 | BRITE: 00001, 03000, 03021, 03041, 03110
eggNOGGOKEGG
eggNOG-inferred
Pa02g4464Pa02g4464.1

Pa02g4464 | Pa02g4464.1 | AGD11 | 337451.A0A3S4NAH6 | ArfGap@131221|Di-9 | ArfGap@131567|A-1* | ArfGap@2759|M-4 | C2@131221|Hig-26 | C2@131567|JB-10 | C2@2759|UX-12! | S | ec:2.7.11.1 | K12486 | 04144 | 00001 | 04131 | ArfGap_118_233 | C2_294_383 | GO...

Show annotation evidence
eggNOG
Preferred name: AGD11 | Seed ortholog: 337451.A0A3S4NAH6 | COG: S | eggNOG OG: ArfGap@131221|Di-9, ArfGap@131567|A-1*, ArfGap@2759|M-4, C2@131221|Hig-26, C2@131567|JB-10, C2@2759|UX-12!
GO
GO:0000281 mitotic cytokinesis; GO:0001410 chlamydospore formation; GO:0001786 phosphatidylserine binding; GO:0003674 molecular_function; GO:0003723 RNA binding; GO:0004175 endopeptidase activity; GO:0004674 protein serine/threonine kinase activity; GO:0005096 GTPase activator activity; GO:0005509 calcium ion binding; GO:0005515 protein binding; GO:0005544 calcium-dependent phospholipid binding; GO:0005545 1...
KEGG
EC: ec:2.7.11.1 | KO: K12486 | Pathway: 04144 | BRITE: 00001, 04131
eggNOGGOKEGG
eggNOG-inferred
Pa02g4500Pa02g4500.1

…GO:0003700 | GO:0005515 | GO:0005634 | GO:0006355 | GO:0009610 | GO:0009739 | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to symbiotic fungus | response to gibberellin

Show annotation evidence
eggNOG
Preferred name: SCL3 | Seed ortholog: 337451.A0A3S3MTR2 | COG: S | eggNOG OG: GRAS@131567|n-8, GRAS@3193|BM-11, GRAS@3398|FK-14
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009610 response to symbiotic fungus; GO:0009739 response to gibberellin
eggNOGGO
eggNOG-inferred
Pa02g4526Pa02g4526.1

Pa02g4526 | Pa02g4526.1 | LOC103719222 | 337451.A0A443NMQ5 | PCI@131567|LE-15 | eIF3_N@2759|A-1 | S | ec:2.6.1.62 | ec:6.3.3.3 | K03250 | 03010 | M00123 | 00001 | 03012 | 03051 | 04147 | PCI_285_399 | eIF3_N_5_137 | GO:0003729 | GO:0005515 | GO:0005634 | GO...

Show annotation evidence
eggNOG
Preferred name: LOC103719222 | Seed ortholog: 337451.A0A443NMQ5 | COG: S | eggNOG OG: PCI@131567|LE-15, eIF3_N@2759|A-1
GO
GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005852 eukaryotic translation initiation factor 3 complex; GO:0006352 DNA-templated transcription initiation; GO:0006412 translation; GO:0008180 COP9 signalosome; GO:0009640 photomorphogenesis; GO:0009908 flower development; GO:0030371 translation repressor activity; GO:0031597 cytosolic...
KEGG
EC: ec:2.6.1.62, ec:6.3.3.3 | KO: K03250 | Pathway: 03010 | Module: M00123 | BRITE: 00001, 03012, 03051, 04147
eggNOGGOKEGG
eggNOG-inferred

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