Functional Annotation Search

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Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046: West Indian T2T annotations
3+: indexed evidence types

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2,385 genes for “transcription factor”

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Select	Gene	Matched annotation	Evidence	Actions
Select Pa07g2882	Pa07g2882`Pa07g2882.1`	…GO:0005634 \| GO:0006355 \| GO:0009408 \| GO:0009567 \| GO:0016602 \| GO:0045893 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| response to heat \| double fertilization forming a zygote and endosperm \| CCAAT-binding factor complex \| positive regulation … Show annotation evidence eggNOG Preferred name: NFYA2 \| Seed ortholog: 337451.A0A443P3Y2 \| COG: S \| eggNOG OG: CBFB_NFYA@2759\|A-1, CBFB_NFYA@33090\|u-9, CBFB_NFYA@3398\|BF-12 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat; GO:0009567 double fertilization forming a zygote and endosperm; GO:0016602 CCAAT-binding factor complex; GO:0045893 positive regulation of DNA-templated transcription KEGG KO: K08064 \| Pathway: 04612, 05017, 05152 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g2887	Pa07g2887`Pa07g2887.1`	…228 \| GO:0070370 \| GO:0071483 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| cytoplasm \| regulation of DNA-templated transcription \| circadian rhythm \| photomorphogenesis \| negative regulation of photomorphogenesis \| vegetative… Show annotation evidence eggNOG Preferred name: BBX19 \| Seed ortholog: 337451.A0A3S3NDH5 \| COG: S \| eggNOG OG: zf-B_box@2759\|B-2!, zf-B_box@33090\|m-7 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0009640 photomorphogenesis; GO:0010100 negative regulation of photomorphogenesis; GO:0010228 vegetative to reproductive phase transition of meristem;... KEGG KO: K12135 \| Pathway: 04712 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g2902	Pa07g2902`Pa07g2902.1`	…832 \| GO:0071365 \| GO:0090059 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| response to fungus \| response to auxin \| response to cytokinin \| response to abscisic acid \| response to b… Show annotation evidence eggNOG Preferred name: NAC030 \| Seed ortholog: 337451.A0A3S3N4Y8 \| COG: S \| eggNOG OG: NAM@131567\|A-1*, NAM@3193\|om-16, NAM@3398\|AmS-21, NAM@35493\|AE-6, NAM@58023\|AGB-18 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009620 response to fungus; GO:0009733 response to auxin; GO:0009735 response to cytokinin; GO:0009737 response to abscisic acid; GO:0009741 response to brassinosteroid; GO:0010089 xylem development; GO...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa07g2942	Pa07g2942`Pa07g2942.1`	…73 \| GO:0071456 \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to brassinosteroid \| negative regulation of flower development \| negative regulation of DNA-templated transcription \| leaf development \| late… Show annotation evidence eggNOG Preferred name: TEM1 \| Seed ortholog: 337451.A0A3S3QJR9 \| COG: S \| eggNOG OG: AP2@131567\|Bx-9, AP2@1437183\|AYA-23, AP2@58023\|Hx-14, B3@131567\|A-1*, B3@33090\|zE-19, B3@35493\|BDo-24 GO GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009741 response to brassinosteroid; GO:0009910 negative regulation of flower development; GO:0045892 negative regulation of DNA-templated transcription; GO:0048366 leaf development; GO:0048527 lateral root development; GO:0048573... KEGG KO: K09287 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g2944	Pa07g2944`Pa07g2944.1`	…nsed chromosome \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| nucleolus \| asymmetric cell division \| response to virus \| polarity specification of adaxial/abaxial axis \| proximal/distal axis specification \| leaf … Show annotation evidence eggNOG Preferred name: AS1 \| Seed ortholog: 337451.A0A443P421 \| COG: S \| eggNOG OG: Myb_DNA-binding@131221\|BKe-31, Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3398\|CbR-34 GO GO:0000793 condensed chromosome; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0008356 asymmetric cell division; GO:0009615 response to virus; GO:0009944 polarity specification of adaxial/abaxial axis; GO:0009946 proximal/distal axis specification; GO... KEGG EC: ec:1.17.99.9 \| KO: K09422 \| Pathway: 00190, 00860, 01100, 01110, 01240, 04626 \| Module: M00154 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g2949	Pa07g2949`Pa07g2949.1`	…is-regulatory region binding \| DNA-binding transcription repressor activity \| DNA-binding transcription factor activity \| protein binding \| nucleus \| mitochondrion \| regulation of DNA-templated transcription \| response to abscisic acid \| cellular response to phosphate starvation \| sequence-specific … Show annotation evidence eggNOG Preferred name: HHO3 \| Seed ortholog: 337451.A0A443P437 \| COG: S \| eggNOG OG: Myb_DNA-binding@33090\|B-2!, Myb_DNA-binding@35493\|AI-8 GO GO:0000976 transcription cis-regulatory region binding; GO:0001217 DNA-binding transcription repressor activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0006355 regulation of DNA-templated transcription; GO:0009737 response to abscisic acid; GO:0016036 cellular response to phosphate starvation; GO:0043565 sequence-specific...	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa07g2953	Pa07g2953`Pa07g2953.1`	Pa07g2953 \| Pa07g2953.1 \| LOC104613306 \| 337451.A0A443P428 \| PB1@131567\|A-1* \| PB1@1437183\|Ccx-31 \| PB1@2759\|DZ-11 \| PB1@3398\|BqK-29 \| PB1@58023\|AbO-25 \| S \| ec:2.7.12.2 \| K04463 \| K14381 \| K17987 \| 04010 \| 04137 \| 04140 \| 04540 \| 04722 \| 04921 \| 05418 \|... Show annotation evidence eggNOG Preferred name: LOC104613306 \| Seed ortholog: 337451.A0A443P428 \| COG: S \| eggNOG OG: PB1@131567\|A-1*, PB1@1437183\|Ccx-31, PB1@2759\|DZ-11, PB1@3398\|BqK-29, PB1@58023\|AbO-25 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005886 plasma membrane; GO:0006468 protein phosphorylation; GO:0007165 signal transduction; GO:0007420 brain development; GO:0007507 heart development; GO:0010608 post-transcriptional regulation of gene expression; GO:0012505 endomembrane system; GO:0030307 positive... KEGG EC: ec:2.7.12.2 \| KO: K04463, K14381, K17987 \| Pathway: 04010, 04137, 04140, 04540, 04722, 04921, 05418 \| BRITE: 00001, 01000, 01001, 03029, 04131, 04147	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g2964	Pa07g2964`Pa07g2964.1`	…GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0009555 \| GO:0009733 \| GO:0009793 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| pollen development \| response to auxin \| embryo development ending in seed dormancy Show annotation evidence eggNOG Preferred name: IAA32 \| Seed ortholog: 337451.A0A443P429 \| COG: S \| eggNOG OG: AUX_IAA@131567\|A-1*, AUX_IAA@2759\|p-6 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009555 pollen development; GO:0009733 response to auxin; GO:0009793 embryo development ending in seed dormancy KEGG KO: K14484 \| Pathway: 04075 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g2973	Pa07g2973`Pa07g2973.1`	…atrioventricular bundle cell differentiation \| cardiac atrium morphogenesis \| DNA-binding transcription factor activity \| nucleus \| mitochondrion \| regulation of DNA-templated transcription \| regulation of transcription by RNA polymerase II \| spermatogenesis \| regulation of mitotic cell cycle \| dete… Show annotation evidence eggNOG Preferred name: BLH11 \| Seed ortholog: 4432.A0A1U8BFH2 \| COG: S \| eggNOG OG: Homeobox_KN@131567\|A-1, Homeobox_KN@2759\|C-2!, Homeobox_KN@3398\|MB-15, Homeobox_KN@58023\|Dh-11, POX@131567\|A-1, POX@3193\|W-7, POX@3398\|Aa-11 GO GO:0000082 G1/S transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000281 mitotic cytokinesis; GO:0001525 angiogenesis; GO:0001654 eye development; GO:0001656 metanephros development; GO:0001700 embryonic development via the syncytial blastoderm; GO:0001742 oenocyte differentiation; GO:0001745 compound eye morphogenesis; GO:0001752 compound eye photoreceptor... KEGG EC: ec:2.1.1.354 \| KO: K09355, K09359, K15610, K15611, K15613, K16670, K16671, K16672, K19383, K19553, K19554, K22748, K24889, K24890, K24891 \| Pathway: 00310, 01100, 04113, 04148, 04350, 04391, 04550, 05202 \| BRITE: 00001, 01000, 03000, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g2974	Pa07g2974`Pa07g2974.1`	…515 \| GO:0005634 \| GO:0048510 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of timing of transition from vegetative to reproductive phase Show annotation evidence eggNOG Preferred name: BLH6 \| Seed ortholog: 337451.A0A3S3MKU7 \| COG: S \| eggNOG OG: Homeobox_KN@131567\|A-1, Homeobox_KN@2759\|C-2!, Homeobox_KN@3398\|MC-15, Homeobox_KN@58023\|Dh-11, POX@131567\|A-1, POX@3193\|W-7, POX@3398\|Bd-13 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0048510 regulation of timing of transition from vegetative to reproductive phase KEGG EC: ec:2.1.1.354 \| KO: K09355, K09359, K15610, K15611, K15613, K16670, K16671, K16672, K19383, K19553, K19554, K22748, K24889, K24890, K24891 \| Pathway: 00310, 01100, 04113, 04148, 04350, 04391, 04550, 05202 \| BRITE: 00001, 01000, 03000, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g2983	Pa07g2983`Pa07g2983.1`	…ing \| RNA polymerase II cis-regulatory region sequence-specific DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: TCP8 \| Seed ortholog: 337451.A0A443P454 \| COG: S \| eggNOG OG: TCP@131221\|AC-7, TCP@131567\|A-1*, TCP@2759\|G-3, TCP@3193\|Fi-13, TCP@3398\|LK-16 GO GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa07g2997	Pa07g2997`Pa07g2997.1`	…700 \| GO:0005515 \| GO:0005634 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus Show annotation evidence eggNOG Preferred name: ERF118 \| Seed ortholog: 4432.A0A1U8AR18 \| COG: S \| eggNOG OG: AP2@131567\|Ho-14, AP2@1437183\|ij-20, AP2@3193\|KF-15 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa07g3001	Pa07g3001`Pa07g3001.1`	…nsed chromosome \| transcription cis-regulatory region binding \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| nucleolus \| cytosol \| regulation of DNA-templated transcription \| negative regulation of cell population proliferation \| asymmetric cell division \| re… Show annotation evidence eggNOG Preferred name: LOC109008155 \| Seed ortholog: 337451.A0A443P455 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@1437183\|Vif-52, Myb_DNA-binding@33090\|FSl-38, Myb_DNA-binding@3398\|Miv-45, Myb_DNA-binding@35493\|KPq-43 GO GO:0000793 condensed chromosome; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0008356 asymmetric cell division; GO... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g3029	Pa07g3029`Pa07g3029.1`	…GO:0003700 \| GO:0005515 \| GO:0005634 \| GO:0006417 \| GO:0009733 \| GO:0042802 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of translation \| response to auxin \| identical protein binding Show annotation evidence eggNOG Preferred name: LOC104604483 \| Seed ortholog: 337451.A0A3S3MRC8 \| COG: S \| eggNOG OG: AUX_IAA@131567\|A-1*, AUX_IAA@2759\|F-3, AUX_IAA@3398\|Bs-9 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006417 regulation of translation; GO:0009733 response to auxin; GO:0042802 identical protein binding KEGG KO: K14484 \| Pathway: 04075 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g3048	Pa07g3048`Pa07g3048.1`	…ption cis-regulatory region binding \| cell fate specification \| DNA binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| gibberellic acid mediated signaling pathway \| unidimensional cell growth \| jasmonic acid mediated signalin… Show annotation evidence eggNOG Preferred name: BnaCnng52970D \| Seed ortholog: 337451.A0A3S3MKY4 \| COG: S \| eggNOG OG: Myb_DNA-binding@131221\|IJn-41, Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@1437183\|PQF-47, Myb_DNA-binding@33090\|DqE-36, Myb_DNA-binding@35493\|GOK-39 GO GO:0000976 transcription cis-regulatory region binding; GO:0001708 cell fate specification; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009740 gibberellic acid mediated signaling pathway; GO:0009826 unidimensional cell growth; GO:0009867 jasmonic acid mediated signaling... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g3070	Pa07g3070`Pa07g3070.1`	…515 \| GO:0005634 \| GO:0006355 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: LOC103719785 \| Seed ortholog: 337451.A0A443P4B1 \| COG: COG2036 \| eggNOG OG: CBFD_NFYB_HMF@131567\|BS-10, CBFD_NFYB_HMF@2759\|IE-16 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription KEGG KO: K21751 \| BRITE: 00001, 03021, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g3080	Pa07g3080`Pa07g3080.1`	…GO:0005515 \| GO:0005634 \| GO:0005739 \| GO:0006355 \| GO:0048766 \| GO:0048768 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| mitochondrion \| regulation of DNA-templated transcription \| root hair initiation \| root hair cell tip growth Show annotation evidence eggNOG Preferred name: LOC104609919 \| Seed ortholog: 56857.A0A200QN34 \| COG: S \| eggNOG OG: HLH@3398\|Vn-14, HLH@58023\|x-7 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0006355 regulation of DNA-templated transcription; GO:0048766 root hair initiation; GO:0048768 root hair cell tip growth	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa07g3082	Pa07g3082`Pa07g3082.1`	…50 \| Homeodomain_61_115 \| GO:0003700 \| GO:0005634 \| GO:0009651 \| GO:0043565 \| DNA-binding transcription factor activity \| nucleus \| response to salt stress \| sequence-specific DNA binding Show annotation evidence eggNOG Preferred name: ATHB-17 \| Seed ortholog: 337451.A0A3S3MT23 \| COG: S \| eggNOG OG: HALZ@131567\|x-8, HALZ@1437183\|Ex-14, Homeodomain@131221\|HaL-32, Homeodomain@131567\|XU-17, Homeodomain@2759\|ACU-20!, Homeodomain@35493\|BwP-25 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009651 response to salt stress; GO:0043565 sequence-specific DNA binding KEGG KO: K09338 \| Pathway: 04113, 04148, 04927, 04934, 05202 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g3095	Pa07g3095`Pa07g3095.1`	…cription by RNA polymerase II \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| chromatin remodeling \| regulation of DNA-templated transcription \| circadian rhythm \| cellular response to starvation \| response to light stimulus \| response to absence… Show annotation evidence eggNOG Preferred name: LOC104609924 \| Seed ortholog: 337451.A0A3S3ML08 \| COG: S \| eggNOG OG: GATA@131567\|A-1*, GATA@2759\|x-6, GATA@33090\|kr-18 GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006338 chromatin remodeling; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0009267 cellular response to starvation; GO:0009416 response to light stimulus; GO:0009646... KEGG KO: K09184, K11648, K11770, K14972, K18658, K21630 \| Pathway: 03082, 03250 \| BRITE: 00001, 01009, 03000, 03019, 03021, 03036	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g3096	Pa07g3096`Pa07g3096.1`	…005737 \| GO:0009736 \| GO:0042802 \| phosphorelay response regulator activity \| DNA-binding transcription factor activity \| protein binding \| cytoplasm \| cytokinin-activated signaling pathway \| identical protein binding Show annotation evidence eggNOG Preferred name: RR21 \| Seed ortholog: 42345.A0A2H3WYF0 \| eggNOG OG: Myb_DNA-binding@131567\|Se-18, Myb_DNA-binding@33090\|Bhp-32, Response_reg\|WPCHNL@131567, Response_reg\|WPCHNL@3193 GO GO:0000156 phosphorelay response regulator activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0009736 cytokinin-activated signaling pathway; GO:0042802 identical protein binding KEGG KO: K14491 \| Pathway: 04075 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g3115	Pa07g3115`Pa07g3115.1`	…087 \| GO:0045893 \| GO:0090057 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| procambium histogenesis \| phloem or xylem histogenesis \| positive regulation of DNA-templated transcription \| root radial pa… Show annotation evidence eggNOG Preferred name: DOF5.6 \| Seed ortholog: 337451.A0A3S3P8U6 \| COG: S \| eggNOG OG: zf-Dof@131567\|A-1*, zf-Dof@3193\|Bv-8, zf-Dof@33090\|d-5, zf-Dof@3398\|GP-11, zf-Dof@58023\|DA-9 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010067 procambium histogenesis; GO:0010087 phloem or xylem histogenesis; GO:0045893 positive regulation of DNA-templated transcription; GO:0090057 root radial pattern formation	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa07g3120	Pa07g3120`Pa07g3120.1`	Pa07g3120 \| Pa07g3120.1 \| Pa07g3120.2 \| arf1 \| 3880.Q5QQ33 \| Arf@131567\|AQ-7 \| Arf@2759\|BGW-24! \| Arf@33090\|Fav-35 \| S \| K07937 \| 04144 \| 00001 \| 04031 \| 04131 \| 04147 \| Arf_5_177 \| GO:0000139 \| GO:0000281 \| GO:0003924 \| GO:0005085 \| GO:0005154 \| GO:0005515... Show annotation evidence eggNOG Preferred name: arf1 \| Seed ortholog: 3880.Q5QQ33 \| COG: S \| eggNOG OG: Arf@131567\|AQ-7, Arf@2759\|BGW-24!, Arf@33090\|Fav-35 GO GO:0000139 Golgi membrane; GO:0000281 mitotic cytokinesis; GO:0003924 GTPase activity; GO:0005085 guanyl-nucleotide exchange factor activity; GO:0005154 epidermal growth factor receptor binding; GO:0005515 protein binding; GO:0005525 GTP binding; GO:0005575 cellular_component; GO:0005737 cytoplasm; GO:0005765 lysosomal membrane; GO:0005794 Golgi apparatus; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006888... KEGG KO: K07937 \| Pathway: 04144 \| BRITE: 00001, 04031, 04131, 04147	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g3130	Pa07g3130`Pa07g3130.1`	…GO:0005634 \| GO:0005739 \| GO:0006355 \| GO:0010088 \| GO:0010089 \| GO:0045893 \| DNA-binding transcription factor activity \| protein binding \| nucleus \| mitochondrion \| regulation of DNA-templated transcription \| phloem development \| xylem development \| positive regulation of DNA-templated transcriptio… Show annotation evidence eggNOG Preferred name: APL \| Seed ortholog: 337451.A0A3S3NSI8 \| COG: S \| eggNOG OG: Myb_CC_LHEQLE@131567\|A-1*, Myb_CC_LHEQLE@3193\|Z-8, Myb_CC_LHEQLE@33090\|S-7, Myb_CC_LHEQLE@3398\|AR-11, Myb_DNA-binding@131567\|dl-20, Myb_DNA-binding@2759\|pK-22, Myb_DNA-binding@3193\|Bsq-33, Myb_DNA-binding@33090\|Apr-30, Myb_DNA-binding@3398\|CRL-34 GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0006355 regulation of DNA-templated transcription; GO:0010088 phloem development; GO:0010089 xylem development; GO:0045893 positive regulation of DNA-templated transcription KEGG EC: ec:6.3.4.5 \| KO: K01940 \| Pathway: 00220, 00250, 01100, 01110, 01230 \| Module: M00029, M00844, M00845, M00978 \| BRITE: 00001, 01000, 04147	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g3209	Pa07g3209`Pa07g3209.1`	…cription cis-regulatory region binding \| endodermal cell fate specification \| DNA-binding transcription factor activity \| protein binding \| nucleus \| regulation of DNA-templated transcription \| leaf development \| bundle sheath cell fate specification Show annotation evidence eggNOG Preferred name: LOC104610998 \| Seed ortholog: 337451.A0A3S3NDW7 \| COG: S \| eggNOG OG: GRAS@131567\|n-8, GRAS@3193\|NC-17, GRAS@3398\|WV-19 GO GO:0000976 transcription cis-regulatory region binding; GO:0001714 endodermal cell fate specification; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0048366 leaf development; GO:0090610 bundle sheath cell fate specification KEGG KO: K27742 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g3220	Pa07g3220`Pa07g3220.1`	…ormation \| inner cell mass cell proliferation \| protein binding \| nucleus \| nucleoplasm \| transcription factor TFIID complex \| cytoplasm \| transcription initiation at RNA polymerase II promoter \| RNA polymerase II general transcription initiation factor activity \| mRNA transcription by RNA polymeras… Show annotation evidence eggNOG Preferred name: LOC101507726 \| Seed ortholog: 337451.A0A443P4P5 \| COG: S \| eggNOG OG: Bromo_TP@131567\|A-1*, Bromo_TP@2759\|Ae-7, Bromo_TP@3398\|Yk-18 GO GO:0001112 DNA-templated transcription open complex formation; GO:0001833 inner cell mass cell proliferation; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005669 transcription factor TFIID complex; GO:0005737 cytoplasm; GO:0006367 transcription initiation at RNA polymerase II promoter; GO:0016251 RNA polymerase II general transcription initiation factor activity; GO:0042789 mRNA... KEGG KO: K14649 \| Pathway: 03022 \| BRITE: 00001, 03021	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g3227	Pa07g3227`Pa07g3227.1`	…0001 \| 01000 \| Myb_DNA-bind_4_26_106 \| GO:0003700 \| GO:0005634 \| GO:0006355 \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription Show annotation evidence eggNOG Preferred name: LOC104608109 \| Seed ortholog: 337451.A0A443P4P4 \| COG: S \| eggNOG OG: Myb_DNA-bind_4@131567\|v-6, Myb_DNA-bind_4@2759\|AN-7, Myb_DNA-bind_4@3193\|sM-18, Myb_DNA-bind_4@35493\|NK-14, Myb_DNA-bind_4@58023\|AOc-20 GO GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription KEGG EC: ec:2.7.7.1, ec:2.7.7.18 \| KO: K06210 \| Pathway: 00760, 01100, 01240 \| Module: M00115, M00912 \| BRITE: 00001, 01000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g3247	Pa07g3247`Pa07g3247.1`	…on cis-regulatory region binding \| response to molecule of bacterial origin \| DNA-binding transcription factor activity \| protein binding \| nucleus \| response to UV \| response to light stimulus \| response to absence of light \| response to ethylene \| lignin biosynthetic process \| induced systemic res… Show annotation evidence eggNOG Preferred name: MYB63 \| Seed ortholog: 337451.A0A443P4R0 \| COG: S \| eggNOG OG: Myb_DNA-binding@131567\|AOS-27, Myb_DNA-binding@3193\|GOC-39, Myb_DNA-binding@33090\|Eca-37, Myb_DNA-binding@3398\|HJq-40 GO GO:0000976 transcription cis-regulatory region binding; GO:0002237 response to molecule of bacterial origin; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009411 response to UV; GO:0009416 response to light stimulus; GO:0009646 response to absence of light; GO:0009723 response to ethylene; GO:0009809 lignin biosynthetic process; GO:0009866 induced... KEGG KO: K09422 \| BRITE: 00001, 03000	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g3263	Pa07g3263`Pa07g3263.1`	…481 \| GO:0048444 \| GO:0051302 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| regulation of meristem structural organization \| guard mother cell cytokinesis \| stomatal complex patterning \| stomatal line… Show annotation evidence eggNOG Preferred name: TCX2 \| Seed ortholog: 337451.A0A443PDT6 \| COG: S \| eggNOG OG: TCR@131221\|Lu-19, TCR@131567\|A-1*, TCR@1437183\|oD-30, TCR@2759\|AQ-7!, TCR@3193\|OY-20, TCR@58023\|hx-27 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009934 regulation of meristem structural organization; GO:0010235 guard mother cell cytokinesis; GO:0010375 stomatal complex patterning; GO:0010440 stomatal lineage progression; GO:0010481 epidermal cell division; GO:0048444... KEGG KO: K21776 \| Pathway: 04218, 04814 \| BRITE: 00001	eggNOGGOKEGG eggNOG-inferred	Record JBrowse Workspace
Select Pa07g3264	Pa07g3264`Pa07g3264.1`	…555 \| GO:0022619 \| GO:0055046 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| pollen development \| generative cell differentiation \| microgametogenesis Show annotation evidence eggNOG Preferred name: LOC109713852 \| Seed ortholog: 337451.A0A3S3N5I3 \| COG: S \| eggNOG OG: HLH@131221\|AqD-20, HLH@131567\|Zg-14!, HLH@1437183\|Gds-31, HLH@33090\|AbJ-19, HLH@3398\|BnA-23 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0022619 generative cell differentiation; GO:0055046 microgametogenesis	eggNOGGO eggNOG-inferred	Record JBrowse Workspace
Select Pa07g3265	Pa07g3265`Pa07g3265.1`	…555 \| GO:0022619 \| GO:0055046 \| transcription cis-regulatory region binding \| DNA-binding transcription factor activity \| nucleus \| regulation of DNA-templated transcription \| pollen development \| generative cell differentiation \| microgametogenesis Show annotation evidence eggNOG Preferred name: LOC109713852 \| Seed ortholog: 337451.A0A3S3N5I3 \| COG: S \| eggNOG OG: HLH@131221\|AqD-20, HLH@131567\|Zg-14!, HLH@1437183\|Gds-31, HLH@33090\|AbJ-19, HLH@3398\|BnA-23 GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0022619 generative cell differentiation; GO:0055046 microgametogenesis	eggNOGGO eggNOG-inferred	Record JBrowse Workspace

Functional Annotation Search

2,385 genes for “transcription factor”

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