Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046
West Indian T2T annotations
3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

Matches

2,385 genes for “transcription factor”

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GO enrichmentExport FASTA
SelectGeneMatched annotationEvidenceActions
Pa07g1803Pa07g1803.1

…355 | GO:0009637 | GO:0009911 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to blue light | positive regulation of flower development

Show annotation evidence
eggNOG
Preferred name: BHLH49 | Seed ortholog: 337451.A0A443P2Q7 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@1437183|ODO-37, HLH@3193|Hds-32, HLH@33090|AbH-19, HLH@3398|Jxn-34
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009637 response to blue light; GO:0009911 positive regulation of flower development
eggNOGGO
eggNOG-inferred
Pa07g1846Pa07g1846.1

…molecular_function | nucleic acid binding | DNA binding | chromatin binding | DNA-binding transcription factor activity | transcription coactivator activity | transcription corepressor activity | histone acetyltransferase activity | enzyme inhibitor activity | protein binding | cellular_component | …

Show annotation evidence
eggNOG
Preferred name: KDM5A | Seed ortholog: 337451.A0A3S3P3V3 | COG: S | eggNOG OG: PHD@131567|A-1*, PHD@2759|Vu-13
GO
GO:0000118 histone deacetylase complex; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000183 rDNA heterochromatin formation; GO:0000212 meiotic spindle organization; GO:0000278 mitotic cell cycle; GO:0000785 chromatin; GO:0000791 euchromatin; GO:0000812 Swr1 complex; GO:0000976 transcription cis-regulatory region binding; GO:0001650 fibrillar center; GO:0002040 sprouting angiogenesis;...
KEGG
EC: ec:1.14.11.65, ec:1.14.11.67, ec:2.3.2.27, ec:3.1.3.16 | KO: K26271 | Pathway: 03022 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa07g1924Pa07g1924.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: LOC104599110 | Seed ortholog: 337451.A0A443N0G7 | COG: COG4886 | eggNOG OG: LRR_8@131567|C-2!, LRR_8@3398|jP-24, NB-ARC@131567|AC-6, NB-ARC@1437183|ERq-33, NB-ARC@3398|CSM-29, NB-ARC@35493|AQS-21
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K13459 | Pathway: 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa07g1925Pa07g1925.1

Pa07g1925 | Pa07g1925.1 | Pa07g1925.2 | LOC104611061 | TIF3B1 | 56857.A0A200PWD3 | 59895.A0A103XEK6 | RRM_1@131567|Gk-13 | RRM_1@2759|hZ-20 | RRM_1@4210|JFr-32 | eIF2A@131567|C-2 | eIF2A@4210|AkW-36 | COG0823 | K03253 | 00001 | 03012 | 03019 | RRM_1_82_136 ...

Show annotation evidence
eggNOG
Preferred name: LOC104611061, TIF3B1 | Seed ortholog: 56857.A0A200PWD3, 59895.A0A103XEK6 | COG: COG0823 | eggNOG OG: RRM_1@131567|Gk-13, RRM_1@2759|hZ-20, RRM_1@4210|JFr-32, eIF2A@131567|C-2, eIF2A@4210|AkW-36
GO
GO:0001732 formation of cytoplasmic translation initiation complex; GO:0002183 cytoplasmic translational initiation; GO:0003313 heart rudiment development; GO:0003743 translation initiation factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005852 eukaryotic translation initiation factor 3 complex; GO:0006396 RNA processing; GO:0006413 translational initiation; GO:0006446...
KEGG
KO: K03253 | BRITE: 00001, 03012, 03019
eggNOGGOKEGG
eggNOG-inferred
Pa07g2047Pa07g2047.1

…GO:0005575 | GO:0005634 | GO:0006355 | GO:0008150 | GO:0009937 | GO:0010336 | DNA-binding transcription factor activity | protein binding | cellular_component | nucleus | regulation of DNA-templated transcription | biological_process | regulation of gibberellic acid mediated signaling pathway | gibb…

Show annotation evidence
eggNOG
Preferred name: FAR1, NUC | Seed ortholog: 337451.A0A3S3NCR2, 337451.A0A3S3PVU4 | COG: S | eggNOG OG: DBD_Tnp_Mut@131221|Ck-9, DBD_Tnp_Mut@131567|A-1*, DBD_Tnp_Mut@2759|AZ-7, MULE@131567|AQ-7, MULE@3398|AMy-21, PB1@131567|A-1*, PB1@2759|Et-12, PB1@3398|LT-15, SWIM@131567|Z-5, SWIM@1437183|AWi-21!, SWIM@3398|AAL-19, zf-C2H2@131567|qO-18, zf-C2H2@2759|AFG-19, zf-C2H2@3193|JjU-31!
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008150 biological_process; GO:0009937 regulation of gibberellic acid mediated signaling pathway; GO:0010336 gibberellic acid homeostasis
KEGG
EC: ec:3.1.1.11 | KO: K17604, K25869, K25870 | Pathway: 00040, 01100, 04137, 04140, 04391, 05168 | Module: M00081 | BRITE: 00001, 01009, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa07g2079Pa07g2079.1

Pa07g2079 | Pa07g2079.1 | LOC101768109 | 337451.A0A3S4P2F5 | Ank_2@131567|BN-7 | Ank_2@1437183|HEP-22 | Ank_2@2759|hc-12 | PGG@131567|A-1* | PGG@3193|DB-9 | PGG@33090|a-5 | PGG@3398|ZL-17! | S | K04971 | K04972 | K04973 | K04974 | K04975 | K04984 | K05222 |...

Show annotation evidence
eggNOG
Preferred name: LOC101768109 | Seed ortholog: 337451.A0A3S4P2F5 | COG: S | eggNOG OG: Ank_2@131567|BN-7, Ank_2@1437183|HEP-22, Ank_2@2759|hc-12, PGG@131567|A-1*, PGG@3193|DB-9, PGG@33090|a-5, PGG@3398|ZL-17!
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001659 temperature homeostasis; GO:0001660 fever generation; GO:0001774 microglial cell activation; GO:0001964 startle response; GO:0002024 diet induced thermogenesis; GO:0002790 peptide secretion; GO:0003085 negative regulation of systemic arterial blood pressure; GO:0004888 transmembrane signaling receptor activity; GO:0005216 monoatomic...
KEGG
KO: K04971, K04972, K04973, K04974, K04975, K04984, K05222 | Pathway: 04080, 04218, 04621, 04750, 04928, 04961, 04970, 04978, 05418 | BRITE: 00001, 04040
eggNOGGOKEGG
eggNOG-inferred
Pa07g2084Pa07g2084.1

…cell cycle | cardiac muscle tissue morphogenesis | RNA polymerase II-specific DNA-binding transcription factor binding | fungal biofilm matrix | R-SMAD binding | cellular response to lipopolysaccharide | cellular response to mechanical stimulus | cellular response to interleukin-1 | cellular respons…

Show annotation evidence
eggNOG
Preferred name: LOC109008780, ORF33 | Seed ortholog: 1590841.A0A2R6R278, 2711.A0A067G1T9 | COG: S | eggNOG OG: Ank_2@131567|BN-7, Ank_2@1437183|qqd-35, Ank_2@1437183|qqe-35, Ank_2@1437201|zFZ-38, Ank_2@2706|ANrj-44, Ank_2@2759|hb-12, Ank_2@3398|BRd-16, Ank_4@131567|Og-18, Ank_4@2706|OHG-35, Ank_5@131567|LD-13, PGG@131567|A-1*, PGG@1437183|YT-17, PGG@1437183|iY-19, PGG@1437201|xn-21, PGG@33090|Z-5
GO
GO:0000082 G1/S transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000791 euchromatin; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0001650 fibrillar center; GO:0001817 regulation of cytokine production; GO:0002039 p53 binding; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO...
KEGG
KO: K04975, K04984, K06647, K06648, K06649, K21433, K21434, K21435, K21438, K21442 | Pathway: 04011, 04111, 04113, 04820 | BRITE: 00001, 03000, 03036, 04040, 04131
eggNOGGOKEGG
eggNOG-inferred
Pa07g2183Pa07g2183.1

…33 | GO:2000144 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | seed germination | regulation of seed germination | trichome morphogenesis | seed coat development | cell differentiation | sequence-specific DNA bind…

Show annotation evidence
eggNOG
Preferred name: 11437324 | Seed ortholog: 337451.A0A443P308 | COG: S | eggNOG OG: Homeodomain@131567|Fe-12, Homeodomain@3193|EBq-28, Homeodomain@3398|Hxb-32, Homeodomain@35493|DQH-27, START@131567|e-5, START@2759|CM-9!, START@3398|tU-19!, START@35493|eI-17
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009845 seed germination; GO:0010029 regulation of seed germination; GO:0010090 trichome morphogenesis; GO:0010214 seed coat development; GO:0030154 cell differentiation; GO:0043565 sequence-specific DNA binding; GO:0048354 mucilage...
KEGG
KO: K09338 | Pathway: 04814 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa07g2201Pa07g2201.1

…11 | NAM@35493|Z-5 | S | NAM_103_244 | GO:0003700 | GO:0005515 | GO:0005634 | DNA-binding transcription factor activity | protein binding | nucleus

Show annotation evidence
eggNOG
Preferred name: NAC008 | Seed ortholog: 337451.A0A3S4N9H1 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|HY-10, NAM@3398|LW-11, NAM@35493|Z-5
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus
eggNOGGO
eggNOG-inferred
Pa07g2230Pa07g2230.1

…cell cycle | cardiac muscle tissue morphogenesis | RNA polymerase II-specific DNA-binding transcription factor binding | fungal biofilm matrix | R-SMAD binding | cellular response to lipopolysaccharide | cellular response to mechanical stimulus | cellular response to interleukin-1 | cellular respons…

Show annotation evidence
eggNOG
Preferred name: LOC104607872 | Seed ortholog: 337451.A0A443P2X9 | COG: S | eggNOG OG: Ank_2@131567|BN-7, Ank_2@1437183|PnG-26!, Ank_2@2759|hb-12, Ank_2@3398|BRd-16, Ank_4@131567|Og-18, PGG@131567|A-1*, PGG@1437183|EY-10!, PGG@33090|Z-5
GO
GO:0000082 G1/S transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000791 euchromatin; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0001650 fibrillar center; GO:0001817 regulation of cytokine production; GO:0002039 p53 binding; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO...
KEGG
KO: K21435 | Pathway: 04011, 04111, 04113, 04820 | BRITE: 00001, 03036
eggNOGGOKEGG
eggNOG-inferred
Pa07g2251Pa07g2251.1

Pa07g2251 | Pa07g2251.1 | Pa07g2251.2 | Pa07g2251.3 | Pa07g2251.4 | LOC102713862 | LOC104604910 | 337451.A0A3S3N4B8 | 3760.A0A251PNI1 | Ank_2@131567|BN-7 | Ank_2@131567|HA-9 | Ank_2@1437183|HEP-22 | Ank_2@2759|hc-12 | Ank_2@3754|nxU-34 | Ank_3@131567|Wt-18 ...

Show annotation evidence
eggNOG
Preferred name: LOC102713862, LOC104604910 | Seed ortholog: 337451.A0A3S3N4B8, 3760.A0A251PNI1 | COG: COG0666 | eggNOG OG: Ank_2@131567|BN-7, Ank_2@131567|HA-9, Ank_2@1437183|HEP-22, Ank_2@2759|hc-12, Ank_2@3754|nxU-34, Ank_3@131567|Wt-18, Ank_3@1437183|CTJ-28, Ank_3@3754|FCq-36, Ank_5@131567|LD-13, Ank_5@1437183|Anj-21, PGG@131567|A-1*, PGG@3193|DB-9, PGG@33090|a-5, PGG@3398|ZL-17!, PGG@3754|BpI-29
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001659 temperature homeostasis; GO:0001660 fever generation; GO:0001774 microglial cell activation; GO:0001964 startle response; GO:0002024 diet induced thermogenesis; GO:0002790 peptide secretion; GO:0003085 negative regulation of systemic arterial blood pressure; GO:0004888 transmembrane signaling receptor activity; GO:0005216 monoatomic...
KEGG
KO: K04971, K04972, K04973, K04974, K04975, K04984, K05222 | Pathway: 04080, 04218, 04621, 04750, 04928, 04961, 04970, 04978, 05418 | BRITE: 00001, 04040
eggNOGGOKEGG
eggNOG-inferred
Pa07g2253Pa07g2253.1

Pa07g2253 | Pa07g2253.1 | LOC106761759 | 337451.A0A443P2C0 | Ank_2@131567|BN-7 | Ank_2@1437183|HEP-22 | Ank_2@2759|hc-12 | Ank_3@131567|Wt-18 | Ank_3@1437183|CTK-28 | PGG@131567|A-1* | PGG@3193|DB-9 | PGG@33090|a-5 | PGG@3398|ZL-17! | S | K04971 | K04972 |...

Show annotation evidence
eggNOG
Preferred name: LOC106761759 | Seed ortholog: 337451.A0A443P2C0 | COG: S | eggNOG OG: Ank_2@131567|BN-7, Ank_2@1437183|HEP-22, Ank_2@2759|hc-12, Ank_3@131567|Wt-18, Ank_3@1437183|CTK-28, PGG@131567|A-1*, PGG@3193|DB-9, PGG@33090|a-5, PGG@3398|ZL-17!
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001659 temperature homeostasis; GO:0001660 fever generation; GO:0001774 microglial cell activation; GO:0001964 startle response; GO:0002024 diet induced thermogenesis; GO:0002790 peptide secretion; GO:0003085 negative regulation of systemic arterial blood pressure; GO:0004888 transmembrane signaling receptor activity; GO:0005216 monoatomic...
KEGG
KO: K04971, K04972, K04973, K04974, K04975, K04984, K05222 | Pathway: 04080, 04218, 04621, 04750, 04928, 04961, 04970, 04978, 05418 | BRITE: 00001, 04040
eggNOGGOKEGG
eggNOG-inferred
Pa07g2254Pa07g2254.1

Pa07g2254 | Pa07g2254.1 | LOC102711474 | 337451.A0A3S3NRN9 | Ank_2@131567|BN-7 | Ank_2@1437183|FgZ-21 | Ank_2@2759|hc-12 | Ank_3@131567|Rc-17 | COG0666 | K04971 | K04972 | K04973 | K04974 | K04975 | K04984 | K05222 | K12460 | K15503 | 04080 | 04218 | 04621 ...

Show annotation evidence
eggNOG
Preferred name: LOC102711474 | Seed ortholog: 337451.A0A3S3NRN9 | COG: COG0666 | eggNOG OG: Ank_2@131567|BN-7, Ank_2@1437183|FgZ-21, Ank_2@2759|hc-12, Ank_3@131567|Rc-17
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001659 temperature homeostasis; GO:0001660 fever generation; GO:0001774 microglial cell activation; GO:0001964 startle response; GO:0002024 diet induced thermogenesis; GO:0002790 peptide secretion; GO:0003085 negative regulation of systemic arterial blood pressure; GO:0003674 molecular_function; GO:0005737 cytoplasm; GO:0005783 endoplasmic...
KEGG
KO: K04971, K04972, K04973, K04974, K04975, K04984, K05222, K12460, K15503 | Pathway: 04080, 04218, 04621, 04750, 04928, 04961, 04970, 04978, 05418 | BRITE: 00001, 01009, 03400, 04040
eggNOGGOKEGG
eggNOG-inferred
Pa07g2259Pa07g2259.1

Pa07g2259 | Pa07g2259.1 | LOC106761759 | 337451.A0A3S3QID1 | Ank_2@131567|BN-7 | Ank_2@1437183|HEP-22 | Ank_2@2759|hc-12 | Ank_3@131567|Wt-18 | Ank_3@1437183|CTK-28 | PGG@131567|A-1* | PGG@3193|DB-9 | PGG@33090|a-5 | PGG@3398|ZL-17! | S | K04971 | K04972 |...

Show annotation evidence
eggNOG
Preferred name: LOC106761759 | Seed ortholog: 337451.A0A3S3QID1 | COG: S | eggNOG OG: Ank_2@131567|BN-7, Ank_2@1437183|HEP-22, Ank_2@2759|hc-12, Ank_3@131567|Wt-18, Ank_3@1437183|CTK-28, PGG@131567|A-1*, PGG@3193|DB-9, PGG@33090|a-5, PGG@3398|ZL-17!
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0001659 temperature homeostasis; GO:0001660 fever generation; GO:0001774 microglial cell activation; GO:0001964 startle response; GO:0002024 diet induced thermogenesis; GO:0002790 peptide secretion; GO:0003085 negative regulation of systemic arterial blood pressure; GO:0004888 transmembrane signaling receptor activity; GO:0005216 monoatomic...
KEGG
KO: K04971, K04972, K04973, K04974, K04975, K04984, K05222 | Pathway: 04080, 04218, 04621, 04750, 04928, 04961, 04970, 04978, 05418 | BRITE: 00001, 04040
eggNOGGOKEGG
eggNOG-inferred
Pa07g2289Pa07g2289.1

…molecular_function | nucleic acid binding | DNA binding | chromatin binding | DNA-binding transcription factor activity | transcription coactivator activity | transcription corepressor activity | histone acetyltransferase activity | enzyme inhibitor activity | protein binding | cellular_component | …

Show annotation evidence
eggNOG
Preferred name: KDM5A | Seed ortholog: 337451.A0A3S3P3V3 | COG: S | eggNOG OG: PHD@131567|A-1*, PHD@2759|Vu-13
GO
GO:0000118 histone deacetylase complex; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000183 rDNA heterochromatin formation; GO:0000212 meiotic spindle organization; GO:0000278 mitotic cell cycle; GO:0000785 chromatin; GO:0000791 euchromatin; GO:0000812 Swr1 complex; GO:0000976 transcription cis-regulatory region binding; GO:0001650 fibrillar center; GO:0002040 sprouting angiogenesis;...
KEGG
EC: ec:1.14.11.65, ec:1.14.11.67, ec:2.3.2.27, ec:3.1.3.16 | KO: K26271 | Pathway: 03022 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa07g2294Pa07g2294.1

…cell cycle | cardiac muscle tissue morphogenesis | RNA polymerase II-specific DNA-binding transcription factor binding | fungal biofilm matrix | R-SMAD binding | cellular response to lipopolysaccharide | cellular response to mechanical stimulus | cellular response to interleukin-1 | cellular respons…

Show annotation evidence
eggNOG
Preferred name: LOC104607872 | Seed ortholog: 337451.A0A443PUQ5 | COG: S | eggNOG OG: Ank_2@131567|BN-7, Ank_2@1437183|PnG-26!, Ank_2@2759|hb-12, Ank_2@3398|BRd-16, Ank_4@131567|Og-18, PGG@131567|A-1*, PGG@1437183|EY-10!, PGG@33090|Z-5
GO
GO:0000082 G1/S transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000791 euchromatin; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0001650 fibrillar center; GO:0001817 regulation of cytokine production; GO:0002039 p53 binding; GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO...
KEGG
KO: K21435 | Pathway: 04011, 04111, 04113, 04820 | BRITE: 00001, 03036
eggNOGGOKEGG
eggNOG-inferred
Pa07g2347Pa07g2347.1

…93|AE-6 | S | NAM_5_136 | GO:0003700 | GO:0005515 | GO:0005634 | GO:0006355 | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: NAC090 | Seed ortholog: 337451.A0A443P345 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|ob-16, NAM@3398|wl-17, NAM@35493|AE-6
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
Pa07g2358Pa07g2358.1

…333 | GO:0071472 | GO:2000039 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | endoplasmic reticulum | plasma membrane | plant-type hypersensitive response | response to salt stress | response to gibberellin | seed germination | …

Show annotation evidence
eggNOG
Preferred name: NTL8 | Seed ortholog: 337451.A0A443P3C8 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|bY-14, NAM@3398|AGu-18, NAM@35493|AE-6
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005783 endoplasmic reticulum; GO:0005886 plasma membrane; GO:0009626 plant-type hypersensitive response; GO:0009651 response to salt stress; GO:0009739 response to gibberellin; GO:0009845 seed germination; GO:0009910 negative regulation of flower...
eggNOGGO
eggNOG-inferred
Pa07g2377Pa07g2377.1

…O:0051302 | GO:0051446 | GO:0051726 | GO:0070176 | GO:0140612 | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | positive regulation of cell population proliferation | response to auxin | trichome morphogenesis | programmed cell death | positive regul…

Show annotation evidence
eggNOG
Preferred name: E2FB | Seed ortholog: 337451.A0A443P390 | COG: S | eggNOG OG: E2F_CC-MB@131567|A-1*, E2F_CC-MB@2759|B-2, E2F_CC-MB@3398|IS-15, E2F_TDP@131567|Af-9, E2F_TDP@3193|bj-27
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0008284 positive regulation of cell population proliferation; GO:0009733 response to auxin; GO:0010090 trichome morphogenesis; GO:0012501 programmed cell death; GO:0045893 positive regulation of DNA-templated transcription; GO:0051302 regulation of cell division; GO...
KEGG
KO: K06620 | Pathway: 01522, 03083, 04110, 04137, 04218, 04350, 04934, 05160, 05161, 05163, 05165, 05166, 05167, 05169, 05200, 05206, 05207, 05212, 05214, 05215, 05218, 05219, 05220, 05222, 05223, 05224, 05225, 05226 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa07g2432Pa07g2432.1

…O:0034605 | GO:0045893 | GO:0050832 | GO:0062211 | GO:1902074 | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | nucleolus | response to osmotic stress | response to cold | response to water deprivation | response to wounding | response to salt stress | chloropla…

Show annotation evidence
eggNOG
Preferred name: ERF114 | Seed ortholog: 337451.A0A3S4P3U2 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@3193|KH-15, AP2@33090|Hp-14, AP2@58023|Bpg-27
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0006970 response to osmotic stress; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009611 response to wounding; GO:0009651 response to salt stress; GO:0009658 chloroplast organization; GO:0009737 response to abscisic acid; GO:0009749...
KEGG
KO: K09286 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa07g2487Pa07g2487.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | mitochondrion | defense response | response to cold | response to water deprivation | response to light stimulus | response to virus | plant-type…

Show annotation evidence
eggNOG
Preferred name: RPS2 | Seed ortholog: 337451.A0A443PC39 | COG: COG4886 | eggNOG OG: LRR_8@131567|C-2!, LRR_8@3398|AAc-26, NB-ARC@131567|AC-6, NB-ARC@3398|PLX-46, NB-ARC@35493|AQS-21
GO
GO:0000166 nucleotide binding; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0006952 defense response; GO:0009409 response to cold; GO:0009414 response to water...
KEGG
EC: ec:3.1.3.16 | KO: K13459 | Pathway: 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa07g2538Pa07g2538.1

…GO:0009686 | GO:0010015 | GO:0010373 | GO:0016036 | GO:0045892 | GO:0055062 | DNA-binding transcription factor activity | nucleus | gibberellin biosynthetic process | root morphogenesis | negative regulation of gibberellin biosynthetic process | cellular response to phosphate starvation | negative r…

Show annotation evidence
eggNOG
Preferred name: MYB62 | Seed ortholog: 337451.A0A3S3QHZ9 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@1437183|Wnv-53, Myb_DNA-binding@3398|JKF-42, Myb_DNA-binding@35493|EcV-37
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009686 gibberellin biosynthetic process; GO:0010015 root morphogenesis; GO:0010373 negative regulation of gibberellin biosynthetic process; GO:0016036 cellular response to phosphate starvation; GO:0045892 negative regulation of DNA-templated transcription; GO:0055062 phosphate ion homeostasis
KEGG
EC: ec:1.17.99.9 | KO: K09422 | Pathway: 00190, 00860, 01100, 01110, 01240, 04626 | Module: M00154 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa07g2555Pa07g2555.1

…090 | GO:0019760 | GO:0022626 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | cytokinin-activated signaling pathway | gibberellic acid mediated signaling pathway | negative regulation …

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eggNOG
Preferred name: GIS3 | Seed ortholog: 337451.A0A3S3MTP8 | COG: S | eggNOG OG: UNK.OJ9D@131567|A-1*, UNK.OJ9D@1437183|C-2!
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009736 cytokinin-activated signaling pathway; GO:0009740 gibberellic acid mediated signaling pathway; GO:0009788 negative regulation of abscisic acid-activated signaling pathway; GO:0010026 trichome...
eggNOGGO
eggNOG-inferred
Pa07g2604Pa07g2604.1

… oxygen species | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to heat | response to cold | response to nematode | response to high light intensity | response t…

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eggNOG
Preferred name: ERF5 | Seed ortholog: 337451.A0A443P3S9 | COG: S | eggNOG OG: AP2@131567|Eb-12, AP2@1437183|hb-20!, AP2@33090|Hk-14
GO
GO:0000302 response to reactive oxygen species; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat; GO:0009409 response to cold; GO:0009624 response to nematode; GO:0009644 response to high light...
KEGG
KO: K09286 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa07g2622Pa07g2622.1

…GO:0097718 | GO:0140296 | GO:0140297 | RNA polymerase I transcription regulator complex | transcription factor TFIIIB complex | chromatin | euchromatin | transcription cis-regulatory region binding | RNA polymerase II cis-regulatory region sequence-specific DNA binding | RNA polymerase II core promo…

Show annotation evidence
eggNOG
Preferred name: TBP | Seed ortholog: 1088818.A0A2I0BE41 | COG: S | eggNOG OG: TBP@131567|A-1, TBP@2759|Hc-14, TBP@3398|ABb-32
GO
GO:0000120 RNA polymerase I transcription regulator complex; GO:0000126 transcription factor TFIIIB complex; GO:0000785 chromatin; GO:0000791 euchromatin; GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding; GO:0000995 RNA polymerase III general...
KEGG
KO: K03120 | Pathway: 03022 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
Pa07g2815Pa07g2815.1

…hogenesis | 3'-UTR-mediated mRNA destabilization | RNA polymerase II-specific DNA-binding transcription factor binding | importin-alpha family protein binding | protein-containing complex assembly | telomerase RNA binding | extracellular exosome | RNA polymerase binding | pyroptotic inflammatory res…

Show annotation evidence
eggNOG
Preferred name: LOC123113315 | Seed ortholog: 337451.A0A3S3MSQ1 | COG: S | eggNOG OG: DEAD@131567|BKe-25, DEAD@2759|GIu-35, DEAD@33090|JHo-39, DEAD@3398|MIZ-42, HA2@131567|O-4, HA2@2759|My-14, HA2@33090|BVR-25, HA2@3398|Clo-28, Helicase_C|I66541@131567, Helicase_C|I66541@2759, Helicase_C|I66541@3398, OB_NTP_bind@131567|B-2, OB_NTP_bind@2759|LN-14, OB_NTP_bind@33090|aJ-18, OB_NTP_bind@3398|sf-21, dsrm@131567|A-1,...
GO
GO:0000228 nuclear chromosome; GO:0000287 magnesium ion binding; GO:0000380 alternative mRNA splicing, via spliceosome; GO:0000781 chromosome, telomeric region; GO:0000785 chromatin; GO:0000805 X chromosome; GO:0000963 mitochondrial RNA processing; GO:0000976 transcription cis-regulatory region binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000993 RNA polymerase II...
KEGG
EC: ec:5.6.2.6 | KO: K14442 | Pathway: 03018 | BRITE: 00001, 01000, 03012, 03019
eggNOGGOKEGG
eggNOG-inferred
Pa07g2816Pa07g2816.1

Pa07g2816 | Pa07g2816.1 | LOC104223302 | 337451.A0A3S3QI49 | MA3@131567|A-1* | MA3@2759|N-4 | MIF4G@131567|A-1* | MIF4G@2759|BX-10 | S | K17583 | 00001 | 01009 | MA3_581_682 | MIF4G_288_493 | GO:0000462 | GO:0003674 | GO:0003676 | GO:0003723 | GO:0003729 |...

Show annotation evidence
eggNOG
Preferred name: LOC104223302 | Seed ortholog: 337451.A0A3S3QI49 | COG: S | eggNOG OG: MA3@131567|A-1*, MA3@2759|N-4, MIF4G@131567|A-1*, MIF4G@2759|BX-10
GO
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003674 molecular_function; GO:0003676 nucleic acid binding; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0006139 nucleobase-containing compound metabolic process; GO:0006412...
KEGG
KO: K17583 | BRITE: 00001, 01009
eggNOGGOKEGG
eggNOG-inferred
Pa07g2825Pa07g2825.1

Pa07g2825 | Pa07g2825.1 | LOC110785322 | 337451.A0A3S4P477 | C2@131567|F-3 | C2@2759|w-6 | C2@3398|CyX-21 | C2@35493|BQe-18 | PRT_C@2759|A-1 | PRT_C@3398|Di-13 | PRT_C@35493|BX-10 | S | ec:3.1.3.64 | ec:3.1.3.95 | K17631 | K17633 | K17634 | K18081 | K19901 ...

Show annotation evidence
eggNOG
Preferred name: LOC110785322 | Seed ortholog: 337451.A0A3S4P477 | COG: S | eggNOG OG: C2@131567|F-3, C2@2759|w-6, C2@3398|CyX-21, C2@35493|BQe-18, PRT_C@2759|A-1, PRT_C@3398|Di-13, PRT_C@35493|BX-10
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0002021 response to dietary excess; GO:0003674 molecular_function; GO:0005634 nucleus; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0007165 signal transduction; GO:0007265 Ras protein signal transduction; GO:0007389 pattern specification process; GO:0008150 biological_process; GO:0008285 negative regulation...
KEGG
EC: ec:3.1.3.64, ec:3.1.3.95 | KO: K17631, K17633, K17634, K18081, K19901 | Pathway: 00562, 01100, 04014, 04070, 04210, 04668 | BRITE: 00001, 01000, 01009
eggNOGGOKEGG
eggNOG-inferred
Pa07g2827Pa07g2827.1

Pa07g2827 | Pa07g2827.1 | LOC110785322 | 337451.A0A3S4P477 | C2@131567|F-3 | C2@2759|w-6 | C2@3398|CyX-21 | C2@35493|BQe-18 | PRT_C@2759|A-1 | PRT_C@3398|Di-13 | PRT_C@35493|BX-10 | S | ec:3.1.3.64 | ec:3.1.3.95 | K17631 | K17633 | K17634 | K18081 | K19901 ...

Show annotation evidence
eggNOG
Preferred name: LOC110785322 | Seed ortholog: 337451.A0A3S4P477 | COG: S | eggNOG OG: C2@131567|F-3, C2@2759|w-6, C2@3398|CyX-21, C2@35493|BQe-18, PRT_C@2759|A-1, PRT_C@3398|Di-13, PRT_C@35493|BX-10
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0002021 response to dietary excess; GO:0003674 molecular_function; GO:0005634 nucleus; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0007165 signal transduction; GO:0007265 Ras protein signal transduction; GO:0007389 pattern specification process; GO:0008150 biological_process; GO:0008285 negative regulation...
KEGG
EC: ec:3.1.3.64, ec:3.1.3.95 | KO: K17631, K17633, K17634, K18081, K19901 | Pathway: 00562, 01100, 04014, 04070, 04210, 04668 | BRITE: 00001, 01000, 01009
eggNOGGOKEGG
eggNOG-inferred
Pa07g2837Pa07g2837.1

…154 | GO:0048768 | GO:0051301 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | circadian rhythm | cell differentiation | root hair cell tip growth | cell division

Show annotation evidence
eggNOG
Preferred name: SCL6 | Seed ortholog: 337451.A0A3S4PFM6 | COG: S | eggNOG OG: GRAS@131567|n-8, GRAS@3193|CH-12, GRAS@3398|JO-16, GRAS@58023|DN-13
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0030154 cell differentiation; GO:0048768 root hair cell tip growth; GO:0051301 cell division
KEGG
KO: K27747 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred

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