Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046
West Indian T2T annotations
3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

Matches

2,385 genes for “transcription factor”

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GO enrichmentExport FASTA
SelectGeneMatched annotationEvidenceActions
Pa03g0072Pa03g0072.1

…742 | GO:1990841 | GO:2000022 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | calmodulin binding | nucleus | response to bacterium | induced systemic resistance | response to abscisic acid | response to gibberellin | negative regulation o…

Show annotation evidence
eggNOG
Preferred name: WRKY11 | Seed ortholog: 337451.A0A443N9S6 | COG: S | eggNOG OG: Plant_zn_clust@131567|A-1*, Plant_zn_clust@1437183|u-6!, Plant_zn_clust@3193|C-2, Plant_zn_clust@3398|O-4, WRKY@131567|A-1*, WRKY@1437183|ArP-27, WRKY@2759|CB-10, WRKY@3193|lG-20, WRKY@33090|Ic-14, WRKY@3398|zS-22
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0009617 response to bacterium; GO:0009682 induced systemic resistance; GO:0009737 response to abscisic acid; GO:0009739 response to gibberellin; GO:0009938 negative regulation of gibberellic acid mediated signaling pathway;...
KEGG
KO: K13425 | Pathway: 04016, 04626 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g0082Pa03g0082.1

…ing | RNA polymerase II cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor activity, RNA polymerase II-specific | cis-regulatory region sequence-specific DNA binding | transcription coregulator binding | transcription corepressor binding | transcription coactivato…

Show annotation evidence
eggNOG
Preferred name: LOC104603150 | Seed ortholog: 337451.A0A443N9U4 | COG: S | eggNOG OG: HALZ@131221|FW-14, HALZ@131567|y-8, HALZ@35493|At-10, Homeodomain@131221|HaM-32, Homeodomain@131567|XU-17, Homeodomain@2759|ACU-20!, Homeodomain@3193|NCH-36, Homeodomain@35493|BwP-25
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000781 chromosome, telomeric region; GO:0000785 chromatin; GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity,...
KEGG
KO: K09338 | Pathway: 04113, 04148, 04927, 04934, 05202 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g0120Pa03g0120.1

…74 | GO:0003700 | GO:0005515 | GO:0005634 | GO:0006355 | molecular_function | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: BHLH146 | Seed ortholog: 337451.A0A3S3MUX8 | COG: S | eggNOG OG: UNK.I4KP@3398|A-1
GO
GO:0003674 molecular_function; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
Pa03g0121Pa03g0121.1

…74 | GO:0003700 | GO:0005515 | GO:0005634 | GO:0006355 | molecular_function | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription

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eggNOG
Preferred name: BHLH146 | Seed ortholog: 337451.A0A3S3MUX8 | COG: S | eggNOG OG: UNK.I4KP@3398|A-1
GO
GO:0003674 molecular_function; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
Pa03g0130Pa03g0130.1

…631 | GO:0042273 | GO:0090070 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | cytosol | plasma membrane | regulation of DNA-templated transcription | rRNA processing | cold acclimation | ribosomal large subunit bioge…

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eggNOG
Preferred name: REIL1 | Seed ortholog: 337451.A0A443N9W8 | COG: S | eggNOG OG: zf-C2H2_2@131567|A-1*, zf-C2H2_2@2759|Bg-11
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006355 regulation of DNA-templated transcription; GO:0006364 rRNA processing; GO:0009631 cold acclimation; GO:0042273 ribosomal large subunit biogenesis; GO:0090070 positive regulation...
KEGG
EC: ec:2.1.1.319 | KO: K14816 | Pathway: 03040, 04391 | BRITE: 00001, 03009
eggNOGGOKEGG
eggNOG-inferred
Pa03g0131Pa03g0131.1

…631 | GO:0042273 | GO:0090070 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | cytosol | plasma membrane | regulation of DNA-templated transcription | rRNA processing | cold acclimation | ribosomal large subunit bioge…

Show annotation evidence
eggNOG
Preferred name: REIL1 | Seed ortholog: 337451.A0A443N9W8 | COG: S | eggNOG OG: zf-C2H2_2@131567|A-1*, zf-C2H2_2@2759|Bg-11
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006355 regulation of DNA-templated transcription; GO:0006364 rRNA processing; GO:0009631 cold acclimation; GO:0042273 ribosomal large subunit biogenesis; GO:0090070 positive regulation...
KEGG
EC: ec:2.1.1.319 | KO: K14816 | Pathway: 03040, 04391 | BRITE: 00001, 03009
eggNOGGOKEGG
eggNOG-inferred
Pa03g0137Pa03g0137.1

…92 | GO:1990110 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription | post-embryonic development | seed germination | lateral root formation | positive regulation of embryonic development | root…

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eggNOG
Preferred name: LOC104603172 | Seed ortholog: 337451.A0A3S3N9M7 | COG: S | eggNOG OG: AP2@131567|Eo-12, AP2@3193|Apr-24, AP2@33090|Xs-18, AP2@3398|CFq-27, AP2@58023|BJE-25
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009791 post-embryonic development; GO:0009845 seed germination; GO:0010311 lateral root formation; GO:0040019 positive regulation of embryonic development; GO:0048364 root development; GO:0060771...
KEGG
KO: K09285 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g0155Pa03g0155.1

…GO:0043565 | GO:0045892 | GO:0060860 | GO:0060862 | GO:0080050 | GO:1901347 | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | sequence-specific DNA binding | negative regulation of DNA-templated transcription | regulation of floral …

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eggNOG
Preferred name: LOC103718394 | Seed ortholog: 337451.A0A443N9V7 | COG: S | eggNOG OG: UNK.EP8F@131567|A-1*, UNK.EP8F@1437183|j-7, UNK.EP8F@3193|B-2, UNK.EP8F@3398|b-6
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:0060860 regulation of floral organ abscission; GO:0060862 negative regulation of floral organ abscission; GO:0080050 regulation of seed development; GO...
eggNOGGO
eggNOG-inferred
Pa03g0175Pa03g0175.1

…226 | GO:0050801 | GO:2000067 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | negative regulation of cell population proliferation | cell differentiation | endodermal cell differentiation | positive regulation of cell differentiation | negative r…

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eggNOG
Preferred name: LOC104599102 | Seed ortholog: 337451.A0A3S4NCF7 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3193|KPo-43, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@3398|Ntj-46, Myb_DNA-binding@35493|JKf-42, Myb_DNA-binding@58023|Mip-45
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0008285 negative regulation of cell population proliferation; GO:0030154 cell differentiation; GO:0035987 endodermal cell differentiation; GO:0045597 positive regulation of cell differentiation; GO:0045892 negative regulation of DNA-templated transcription; GO:0045893 positive...
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g0237Pa03g0237.1

…507 | GO:0009742 | GO:0040008 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | chloroplast | brassinosteroid mediated signaling pathway | regulation of growth

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eggNOG
Preferred name: LOC107928278 | Seed ortholog: 337451.A0A3S3N9R9 | COG: S | eggNOG OG: UNK.LG8Z@131567|A-1*, UNK.LG8Z@3398|c-5
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0009507 chloroplast; GO:0009742 brassinosteroid mediated signaling pathway; GO:0040008 regulation of growth
eggNOGGO
eggNOG-inferred
Pa03g0267Pa03g0267.1

…33 | GO:2000144 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | seed germination | regulation of seed germination | trichome morphogenesis | seed coat development | cell differentiation | sequence-specific DNA bind…

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eggNOG
Preferred name: 11437324 | Seed ortholog: 337451.A0A443NA58 | COG: S | eggNOG OG: Homeodomain@131567|Fe-12, Homeodomain@3193|EBq-28, Homeodomain@3398|Hxb-32, Homeodomain@35493|DQH-27, START@131567|e-5, START@2759|CM-9!, START@3398|tU-19!, START@35493|eI-17
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009845 seed germination; GO:0010029 regulation of seed germination; GO:0010090 trichome morphogenesis; GO:0010214 seed coat development; GO:0030154 cell differentiation; GO:0043565 sequence-specific DNA binding; GO:0048354 mucilage...
KEGG
KO: K09338 | Pathway: 04814 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g0268Pa03g0268.1

…33 | GO:2000144 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | seed germination | regulation of seed germination | trichome morphogenesis | seed coat development | cell differentiation | sequence-specific DNA bind…

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eggNOG
Preferred name: 11437324 | Seed ortholog: 337451.A0A3S3MFF8 | COG: S | eggNOG OG: Homeodomain@131567|Fe-12, Homeodomain@3193|EBq-28, Homeodomain@3398|Hxb-32, Homeodomain@35493|DQH-27, START@131567|e-5, START@2759|CM-9!, START@3398|tU-19!, START@35493|eI-17
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009845 seed germination; GO:0010029 regulation of seed germination; GO:0010090 trichome morphogenesis; GO:0010214 seed coat development; GO:0030154 cell differentiation; GO:0043565 sequence-specific DNA binding; GO:0048354 mucilage...
KEGG
KO: K09338 | Pathway: 04814 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g0269Pa03g0269.1

…723 | GO:1901959 | GO:1904278 | transcription cis-regulatory region binding | DNA-binding transcription factor activity, RNA polymerase II-specific | DNA binding | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription | response to water deprivation | respon…

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eggNOG
Preferred name: LOC104224544 | Seed ortholog: 337451.A0A443NA35 | COG: S | eggNOG OG: AP2@131567|Eo-12, AP2@3193|Bfh-26, AP2@33090|Xs-18, AP2@3398|ExS-31!
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009651 response to salt stress; GO:0009737 response to abscisic acid; GO:0010187...
KEGG
KO: K09285 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g0290Pa03g0290.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

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eggNOG
Preferred name: LOC108511758 | Seed ortholog: 4432.A0A1U7ZSP0 | COG: COG4886 | eggNOG OG: LRR_8@131567|C-2!, LRR_8@1437183|Arh-29, LRR_8@3398|Fa-15, NB-ARC@131567|AC-6, NB-ARC@1437183|GNn-36, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|Sa-12
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa03g0309Pa03g0309.1

Pa03g0309 | Pa03g0309.1 | LOC104233100 | 337451.A0A3S3M1N4 | MIF4G@131567|A-1* | MIF4G@2759|Od-17 | MIF4G@3398|ASk-27 | S | K03260 | 05416 | 00001 | 03012 | 03019 | MIF4G_358_583 | MIF4G_618_841 | MIF4G_98_323 | GO:0001671 | GO:0002183 | GO:0003676 | GO...

Show annotation evidence
eggNOG
Preferred name: LOC104233100 | Seed ortholog: 337451.A0A3S3M1N4 | COG: S | eggNOG OG: MIF4G@131567|A-1*, MIF4G@2759|Od-17, MIF4G@3398|ASk-27
GO
GO:0001671 ATPase activator activity; GO:0002183 cytoplasmic translational initiation; GO:0003676 nucleic acid binding; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0003743 translation initiation factor activity; GO:0005198 structural molecule activity; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0006139 nucleobase-containing compound metabolic process; GO:0006412 translation; GO:0006413...
KEGG
KO: K03260 | Pathway: 05416 | BRITE: 00001, 03012, 03019
eggNOGGOKEGG
eggNOG-inferred
Pa03g0328Pa03g0328.1

…19 | S | WRKY_250_304 | WRKY_413_470 | GO:0003700 | GO:0005515 | GO:0005634 | DNA-binding transcription factor activity | protein binding | nucleus

Show annotation evidence
eggNOG
Preferred name: LOC110803333 | Seed ortholog: 337451.A0A3S3NUJ1 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|Uo-17, WRKY@33090|fR-19
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus
eggNOGGO
eggNOG-inferred
Pa03g0331Pa03g0331.1

Pa03g0331 | Pa03g0331.1 | Pa03g0331.2 | BnaA04g14170D | 337451.A0A3S3MV88 | LRR_1@131567|AkJ-19 | LRR_1@1437183|Hgq-31 | LRR_1@2759|BDd-20 | LRR_1@3193|EIm-26 | LRR_1@33090|CwW-24 | LRR_6@131567|nU-18 | LRR_6@2759|we-19 | LRR_6@3193|Flv-30 | LRR_6@35493|DRA...

Show annotation evidence
eggNOG
Preferred name: BnaA04g14170D | Seed ortholog: 337451.A0A3S3MV88 | COG: S | eggNOG OG: LRR_1@131567|AkJ-19, LRR_1@1437183|Hgq-31, LRR_1@2759|BDd-20, LRR_1@3193|EIm-26, LRR_1@33090|CwW-24, LRR_6@131567|nU-18, LRR_6@2759|we-19, LRR_6@3193|Flv-30, LRR_6@35493|DRA-27, LRR_8@131567|gj-23, LRR_8@2759|BDN-29, LRR_8@3193|FcU-35, PK_Tyr_Ser-Thr@131567|TO-14, PK_Tyr_Ser-Thr@3193|HMl-33, PK_Tyr_Ser-Thr@35493|DRm-27, PK_Tyr...
GO
GO:0000302 response to reactive oxygen species; GO:0000325 plant-type vacuole; GO:0001932 regulation of protein phosphorylation; GO:0002221 pattern recognition receptor signaling pathway; GO:0002224 toll-like receptor signaling pathway; GO:0002229 defense response to oomycetes; GO:0002237 response to molecule of bacterial origin; GO:0002238 response to molecule of fungal origin; GO:0002446 neutrophil mediated...
KEGG
EC: ec:2.7.11.1 | KO: K00924 | Pathway: 04075 | BRITE: 00001, 01000, 01001 | CAZy: CBM57|Carbohydrate-Binding Module Family 57.
eggNOGGOKEGG
eggNOG-inferred
Pa03g0338Pa03g0338.1

…767 | GO:0055046 | GO:0080147 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | pollen sperm cell differentiation | root hair cell differentiation | root hair elongation | microgametogen…

Show annotation evidence
eggNOG
Preferred name: BHLH69, BnaA04g14200D | Seed ortholog: 337451.A0A443NAA6, 4432.A0A1U8BGR4 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|CEh-24, HLH@33090|AbH-19, UNK.7J2B@3398|A-1
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0048235 pollen sperm cell differentiation; GO:0048765 root hair cell differentiation; GO:0048767 root hair elongation; GO:0055046 microgametogenesis; GO:0080147 root hair cell development
eggNOGGO
eggNOG-inferred
Pa03g0351Pa03g0351.1

…nse to molecule of bacterial origin | response to molecule of fungal origin | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | regulation of DNA-templated transcription | defense response | response to cold | response to water deprivation | response to wounding | r…

Show annotation evidence
eggNOG
Preferred name: WRKY40 | Seed ortholog: 337451.A0A443NA92 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|Ea-12, WRKY@3398|QN-16, WRKY@35493|Io-14
GO
GO:0000976 transcription cis-regulatory region binding; GO:0002237 response to molecule of bacterial origin; GO:0002238 response to molecule of fungal origin; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0006952 defense response; GO:0009409 response to cold; GO:0009414 response to...
eggNOGGO
eggNOG-inferred
Pa03g0369Pa03g0369.1

… regulator activity | phosphorelay signal transduction system | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | response to water deprivation | chloroplast | response to cytokinin | cytokinin-activated signaling pathway | regulation of root meristem …

Show annotation evidence
eggNOG
Preferred name: ARR12 | Seed ortholog: 337451.A0A443NAD7 | COG: S | eggNOG OG: Myb_DNA-binding@131567|Se-18, Myb_DNA-binding@33090|BNt-31, Myb_DNA-binding@3398|Bho-32, Response_reg|AT38GL@131567, Response_reg|AT38GL@1437183, Response_reg|AT38GL@2759, Response_reg|AT38GL@33090
GO
GO:0000156 phosphorelay response regulator activity; GO:0000160 phosphorelay signal transduction system; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009414 response to water deprivation; GO:0009507 chloroplast; GO:0009735 response to cytokinin; GO:0009736 cytokinin-activated signaling pathway; GO:0010082...
KEGG
KO: K14491 | Pathway: 04075 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa03g0379Pa03g0379.1

…98|Wi-18 | S | AP2_7_56 | GO:0003700 | GO:0005515 | GO:0005634 | GO:0009873 | DNA-binding transcription factor activity | protein binding | nucleus | ethylene-activated signaling pathway

Show annotation evidence
eggNOG
Preferred name: LOC100830736 | Seed ortholog: 337451.A0A3S3MKR8 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@3193|Nj-16, AP2@33090|Hu-14, AP2@3398|Wi-18
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009873 ethylene-activated signaling pathway
eggNOGGO
eggNOG-inferred
Pa03g0417Pa03g0417.1

…GO:0005515 | GO:0005634 | GO:0005829 | GO:0009416 | GO:0009722 | GO:0071345 | DNA-binding transcription factor activity | protein binding | nucleus | cytosol | response to light stimulus | detection of cytokinin stimulus | cellular response to cytokine stimulus

Show annotation evidence
eggNOG
Preferred name: KNAT3 | Seed ortholog: 337451.A0A3S3MKT1 | COG: S | eggNOG OG: ELK@131567|A-1*, ELK@33090|B-2, ELK@3398|ES-12, Homeobox_KN@131567|A-1*, Homeobox_KN@2759|B-2, Homeobox_KN@3193|CA-10, Homeobox_KN@3398|hs-20, KNOX1@131567|A-1*, KNOX1@33090|C-2, KNOX1@3398|CI-11, KNOX2@131567|A-1*, KNOX2@3193|M-4, KNOX2@35493|C-2, KNOX2@58023|QK-16
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0009416 response to light stimulus; GO:0009722 detection of cytokinin stimulus; GO:0071345 cellular response to cytokine stimulus
eggNOGGO
eggNOG-inferred
Pa03g0420Pa03g0420.1

…K13434 | 00001 | 03000 | AP2_104_153 | GO:0003700 | GO:0005634 | GO:0009873 | DNA-binding transcription factor activity | nucleus | ethylene-activated signaling pathway

Show annotation evidence
eggNOG
Preferred name: LOC104603385 | Seed ortholog: 337451.A0A3S3MVC9 | eggNOG OG: AP2@131567|Ft-13, AP2@2759|Hm-14
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009873 ethylene-activated signaling pathway
KEGG
KO: K13434 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa03g0496Pa03g0496.1

…e of mitochondrial outer membrane | positive regulation of type I interferon production | transcription factor TFTC complex | histone binding | positive regulation of apoptotic process | regulation of RNA splicing | transcription initiation-coupled chromatin remodeling | positive regulation of DNA-t…

Show annotation evidence
eggNOG
Preferred name: LOC103710115 | Seed ortholog: 337451.A0A3S4ND78 | COG: S | eggNOG OG: UCH@131567|Ea-15, UCH@3398|FBL-35, zf-UBP@2759|mP-21, zf-UBP@3398|BZm-32
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000124 SAGA complex; GO:0003682 chromatin binding; GO:0003713 transcription coactivator activity; GO:0004197 cysteine-type endopeptidase activity; GO:0004843 cysteine-type deubiquitinase activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005694 chromosome; GO:0005737 cytoplasm; GO:0005739...
KEGG
EC: ec:3.4.19.12 | KO: K11366 | Pathway: 03083 | BRITE: 00001, 01000, 01002, 03021, 03036, 04121
eggNOGGOKEGG
eggNOG-inferred
Pa03g0547Pa03g0547.1

Pa03g0547 | Pa03g0547.1 | Rif1 | 337451.A0A3S3MFY3 | Rif1_N@2759|A-1 | S | K11138 | 04550 | 00001 | 03032 | Rif1_N_41_402 | GO:0000122 | GO:0000723 | GO:0000729 | GO:0000781 | GO:0000785 | GO:0000792 | GO:0000793 | GO:0000979 | GO:0001700 | GO:0001939 | GO...

Show annotation evidence
eggNOG
Preferred name: Rif1 | Seed ortholog: 337451.A0A3S3MFY3 | COG: S | eggNOG OG: Rif1_N@2759|A-1
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000723 telomere maintenance; GO:0000729 DNA double-strand break processing; GO:0000781 chromosome, telomeric region; GO:0000785 chromatin; GO:0000792 heterochromatin; GO:0000793 condensed chromosome; GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding; GO:0001700 embryonic development via the syncytial blastoderm; GO...
KEGG
KO: K11138 | Pathway: 04550 | BRITE: 00001, 03032
eggNOGGOKEGG
eggNOG-inferred
Pa03g0554Pa03g0554.1

…e organ development | adipose tissue development | RNA polymerase II-specific DNA-binding transcription factor binding | fungal biofilm matrix | protein-containing complex assembly | telomerase RNA binding | neuron cellular homeostasis | extracellular exosome | precatalytic spliceosome | cellular re…

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eggNOG
Preferred name: PRT1 | Seed ortholog: 337451.A0A443PRT8 | COG: S | eggNOG OG: RRM_1@131567|Gk-13, RRM_1@2759|IU-14!
GO
GO:0000302 response to reactive oxygen species; GO:0000375 RNA splicing, via transesterification reactions; GO:0000380 alternative mRNA splicing, via spliceosome; GO:0000381 regulation of alternative mRNA splicing, via spliceosome; GO:0000398 mRNA splicing, via spliceosome; GO:0000422 autophagy of mitochondrion; GO:0000785 chromatin; GO:0000791 euchromatin; GO:0001659 temperature homeostasis; GO:0001666 response...
KEGG
EC: ec:2.1.1.203, ec:2.1.1.229, ec:2.1.1.354, ec:2.3.1.199, ec:2.3.1.48, ec:2.3.2.26, ec:2.3.2.27, ec:2.4.99.18, ec:2.7.11.1, ec:2.7.7.19, ec:2.7.7.52, ec:4.2.1.1, ec:4.6.1.1, ec:5.4.99.30, ec:5.6.2.6, ec:5.6.2.7 | KO: K02603, K03062, K03099, K03102, K03248, K03253, K03258, K04954, K05657, K06874, K07151, K07202, K07207, K10203, K10273, K10523, K10591, K10643, K10770, K10841, K10874, K11090, K11093, K11265, K11292...
eggNOGGOKEGG
eggNOG-inferred
Pa03g0706Pa03g0706.1

…O:0006386 | GO:0008270 | GO:0042780 | GO:0042797 | GO:0061484 | DNA binding | DNA-binding transcription factor activity | DNA-directed RNA polymerase activity | protein binding | cellular_component | nucleus | nucleoplasm | RNA polymerase III complex | cytosol | DNA-templated transcription elongatio…

Show annotation evidence
eggNOG
Preferred name: LOC101782188 | Seed ortholog: 42345.A0A2H3Z249 | COG: COG1594 | eggNOG OG: TFIIS_C@131567|Ar-7
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003899 DNA-directed RNA polymerase activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005666 RNA polymerase III complex; GO:0005829 cytosol; GO:0006354 DNA-templated transcription elongation; GO:0006355 regulation of DNA-templated transcription; GO:0006383...
KEGG
KO: K03019 | Pathway: 03020 | BRITE: 00001, 01611, 03021
eggNOGGOKEGG
eggNOG-inferred
Pa03g0727Pa03g0727.1

Pa03g0727 | Pa03g0727.1 | Pa03g0727.2 | Pa03g0727.3 | Pa03g0727.4 | Pa03g0727.5 | 11431608 | LOC107829944 | 337451.A0A3S3ML71 | 337451.A0A443NB26 | FAR1@131567|A-1* | FAR1@2759|DL-11 | FAR1@3398|FG-13 | Pyrid_oxidase_2@131567|A-1 | COG0748 | S | K25476 |...

Show annotation evidence
eggNOG
Preferred name: 11431608, LOC107829944 | Seed ortholog: 337451.A0A3S3ML71, 337451.A0A443NB26 | COG: COG0748, S | eggNOG OG: FAR1@131567|A-1*, FAR1@2759|DL-11, FAR1@3398|FG-13, Pyrid_oxidase_2@131567|A-1
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0003674 molecular_function; GO:0003714 transcription corepressor activity; GO:0005159 insulin-like growth factor receptor binding; GO:0005576 extracellular region; GO:0005667 transcription regulator complex; GO:0005764 lysosome; GO:0005768 endosome; GO:0005783 endoplasmic reticulum; GO:0005794 Golgi apparatus; GO:0006355 regulation of DNA...
KEGG
KO: K25476 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
Pa03g0753Pa03g0753.1

…700 | GO:0005634 | GO:0009793 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | embryo development ending in seed dormancy

Show annotation evidence
eggNOG
Preferred name: NAC029 | Seed ortholog: 337451.A0A443NB79 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@1437183|AlZ-21, NAM@3193|wx-17, NAM@3398|APh-19, NAM@35493|AE-6
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009793 embryo development ending in seed dormancy
eggNOGGO
eggNOG-inferred
Pa03g0756Pa03g0756.1

…677 | GO:1900057 | GO:1903648 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | calcium ion binding | protein binding | nucleus | cytoplasm | molecular function activator activity | positive regulation of leaf senescence | positive regulation of chlorophyll …

Show annotation evidence
eggNOG
Preferred name: LOC104611190 | Seed ortholog: 337451.A0A443NB53 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@1437183|Baz-24, NAM@3193|Aav-20, NAM@35493|AE-6
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005509 calcium ion binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0140677 molecular function activator activity; GO:1900057 positive regulation of leaf senescence; GO:1903648 positive regulation of chlorophyll catabolic process
eggNOGGO
eggNOG-inferred

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